Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1184 ATGGCTGTAGAAAACGGAAACGAAGTAGATGAGTTGGAACCATTGAAGTTGCTTCCTCCAAAGAGAATCAGCGATGATTCATCAAAGATCATTTTACAGTCACATGGCACTGTAAGCATTGAATTATTCGAAAGTCCAGATCAGTGCAAGGAAGTTAAAATGGAGGAGACTTCCGGAAGTAGGACAAATGTCAATGACGCATTGAAAGATCTTAAATCTACCGATATGCCTCCGTTGGTCGATGACAGGATTAATGACAATAAAGTAGCTCCGAACGTTAGAATAGGTGATAGCAAAGTATCCTTGGAATGCAAGCAGACGTCGATGAATTCTGATAGCATGAAACCTCTCCAAATCATTGTACAGCCATCAAATACTACTGGTTTAGAAATGCCGCCCAAAGGTGACATTGGAAGGATTCAAGATGAAAAATGCGATGAAGTTAACCATTTGAATGATAAGTCAATAGCTGCAGATATGAAAAGTATGGACTTTTCTACGGGTCCCCTTTCGTTACAGAAGTTTCCTCTATCCTCTTTGAAGACGAATGCCATGCCCAGCGATGCAACTGTTCCTAATCTGCAAAACATGTCCAAACATTTGCATAATGAAGAGAAACGGAACTTTAGTAGAGTTCAGGCATCAATGGGTGCTTATGGCATTGTTTACAAGGCAAGGAGGAAGAGCGATGGAGCCACGGTTGCCATTAAATGCCCTCATGCTAAAGCTCACGGGCAATATGTTACGAATGAACTGAAAGTGCTGGAGCGATTTGGGCCTGAGGTGTTGAGGAAAGAAATTGATATTGTTCAACTCCGATGGTATGGTTACTGCATGTTCAGGGCTCTTGCAGCTCTTCACAAGCGGGGAGTAATACACAGAGATGTTAAACCTGCCAATTTCCTTTTCTCCCGTAAGCTTAAGAAAGGCTACCTTATTGATTTCAATCTTGCCAAGGATCTGCATCAGAAGCCAGGAAATATCACTTCAACCAAATGCAGAAAGTTCCCAAATGTCAATTTTTTGGAAATTGCTAATCAACAGACAACTAATGCCTCCAAGATTTTAGATCCAAAAGACAACAGAAGAAGGACAGTGGTGCAGTCAAAGACTAAAAATGACCGAAGTAGTGGGCAGGTAATGAAAAGTCAAGGTGCAGATGGCTCAGGAGTAACTTCCGCAAGGGATGTGACCAGCACAAGAACATCACTTGAAAAGAGACCGAGTCTGGTATTGTTCAGGTCTCCTCATCAAGGACCTAAGCTTGACGTCTGGTCTGCCGGTGTATCGTTGCTCTATCTCATAATCGGGAAAGTTCCGTTCACCGGGGATCCTGAACAGAACATAAAGGATATAGCTAAACTTAGAGGCAGTGAAGATCTATGGGAAGTTGCTAAGCTACACAATCGGGAATCCTCAGTCCCTGCGGACTTATACGATAAACAAAGTATGCCATCTTTGCCACTTCGAGATTGGTGCTTAATGAACACAAAGAGACCAGAGTTTCTAGAAATCATTCCAAGTTCACTGTTTGATCTTGTGGACAAGTGCTTGATGGTGAACCCTAGGGTGAGAATCGTGCAGAGGAAGCTCTTCAGCATGAGTTTTTTGCTCCATGCCATTAGAGCCTGA 1632 0.4271 MAVENGNEVDELEPLKLLPPKRISDDSSKIILQSHGTVSIELFESPDQCKEVKMEETSGSRTNVNDALKDLKSTDMPPLVDDRINDNKVAPNVRIGDSKVSLECKQTSMNSDSMKPLQIIVQPSNTTGLEMPPKGDIGRIQDEKCDEVNHLNDKSIAADMKSMDFSTGPLSLQKFPLSSLKTNAMPSDATVPNLQNMSKHLHNEEKRNFSRVQASMGAYGIVYKARRKSDGATVAIKCPHAKAHGQYVTNELKVLERFGPEVLRKEIDIVQLRWYGYCMFRALAALHKRGVIHRDVKPANFLFSRKLKKGYLIDFNLAKDLHQKPGNITSTKCRKFPNVNFLEIANQQTTNASKILDPKDNRRRTVVQSKTKNDRSSGQVMKSQGADGSGVTSARDVTSTRTSLEKRPSLVLFRSPHQGPKLDVWSAGVSLLYLIIGKVPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSVPADLYDKQSMPSLPLRDWCLMNTKRPEFLEIIPSSLFDLVDKCLMVNPRVRIVQRKLFSMSFLLHAIRA 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1184 543 SUPERFAMILY Protein kinase-like (PK-like) 217 538 IPR011009 -
Lele55g1184 543 Gene3D Phosphorylase Kinase; domain 1 199 267 - -
Lele55g1184 543 FunFam Kinase like protein 255 330 - -
Lele55g1184 543 ProSiteProfiles Protein kinase domain profile. 126 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1184 543 MobiDBLite consensus disorder prediction 356 370 - -
Lele55g1184 543 MobiDBLite consensus disorder prediction 352 402 - -
Lele55g1184 543 SMART serkin_6 208 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1184 543 MobiDBLite consensus disorder prediction 371 402 - -
Lele55g1184 543 Gene3D Transferase(Phosphotransferase) domain 1 268 542 - -
Lele55g1184 543 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 265 526 - -
Lele55g1184 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Lele55g1184 543 Pfam Protein kinase domain 267 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1184 543 Pfam Protein kinase domain 412 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1184 Lele-ChrLele55 18447284 18452402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1184 265 444 AGC Kinase Gene Family AT5G40030 24.865 7.44e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lele55g1184 Pkinase 6.8e-08 CL0016