Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1177 ATGATGTCGTTGCAGATCAGTTCAGCTATTCCATTGTACAACGCTCGCGTGTTTCAGGTTAGACGTGCTAGCTTCCGATGCCAAGCTTCTCCATTAAATCCTTCCACGAAACCATCGCCGCCGTCTTCCACCGAGTCCACTCGCTTTCACATCGCAAACCTCGACAAGCTCCTCCAGAAGCAATCGCCTCCTACTATCACCCAATTCGAACAACAACAACAACAACCAAAGCCTCTTCAGAAGGAAACTGAAAACGAAAAGAGATCGAAGAACATAGTCGAAGGTCTGAGTTTAGCGAGGCTATGGCCAGAAATGAAAGCCACAGAAGAGATGTCTCCGAGGCATCTCAACCGCTTACAGCGTCTGTTATCGAAGACGATGGAGTATTCCCCTCGGAACATTCTCGGGAGCCGGTGGAGGGAATACCACGGAAGTAACCATTGGAAAGGACTCCTAGATCCGCTAGACGAGAATCTCCGGCGAGAGGTTGTCCGGTACGGCGAGTTCGTACAAGCCGCTTACCATTCGTTTAACACCGATCCCGCCATGTCACCGGAGGAGCCGCCCACGCCCCAACGGATCGTTTTGTCGGATAGGTCCTACAAAGTTACAAAGAGCCTCTATGCCACGTCATCAATCGGGTTGCCCAAATGGGTTGACGACGTGGCTCCGGATCTCGGATGGATGACCCAGCGATCGAGTTGGATCGGGTACGTCGCCGTTTGCGATGATCGGAGAGAGATCGCCAGGATGGGACGGAGGGACATCGTAATATCTCTTCGTGGGACAGCGACGTGCCTGGAGTGGGCGGAGAATACCCGGGCCCAACTAACTGATATGCTTCCAAAGATTGGTGATGACTCAGCTACGGCCCATGAAAAGCCCAAAGTGGAGTGTGGGTTCTTGAGCCTGTACAAGACCCCAGGGGCTCACGTGCCAAGCCTAGCCAAGTCTGTGATAGAAGAAGTGAAAAGGCTCATGGAAGTATACAAAGGGGAGACACTCAGCATCACGGTAACTGGTCATAGCCTCGGTGCCGCGCTGGCGTTGCTCGTGGCTGATGAGATCAGCACTTGCGGCGCTGATGTGCCACCGGTGGCAGTAATCTCCTTCGGTGGGCCTCGAGTGGGAAATAAGGCCTTCAAGGATCGATTAGCAGCCCAAAATGTAAAAGTATTAAGAATAGTGAACTCTCAAGATGTGATTACTAGGGTTCCAGGGATGTTCATGAGTGAAGAAGTCGAACAAAAACTAAGCAGTTCCAAGATAGGAGAAACGATAGAGAACATGGGGTTTGGATATACACACGTGGGAGTAGAGCTGCTCGTAGATACGAAGATGTCGCCGTATCTGAAGCCGGATGCTGACATGGCATGTTGCCATGACCTAGAGGCTTATTTGCACCTGGTGGATGGGTATTTGGCATCAAATTGTCCGTTCAGATCAAATGCCAAGAGGAGCTTGCGAAGATTAATGCAAGATCAAACATCCAATATGAAGAAATTATATACTAGCAAGGCAAAAGCCTTGAGTGTAAACCTTGTGAAACAAGGCTCTTTCTCTATGCCTAGTTCATCTTAA 1581 0.5022 MMSLQISSAIPLYNARVFQVRRASFRCQASPLNPSTKPSPPSSTESTRFHIANLDKLLQKQSPPTITQFEQQQQQPKPLQKETENEKRSKNIVEGLSLARLWPEMKATEEMSPRHLNRLQRLLSKTMEYSPRNILGSRWREYHGSNHWKGLLDPLDENLRREVVRYGEFVQAAYHSFNTDPAMSPEEPPTPQRIVLSDRSYKVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWIGYVAVCDDRREIARMGRRDIVISLRGTATCLEWAENTRAQLTDMLPKIGDDSATAHEKPKVECGFLSLYKTPGAHVPSLAKSVIEEVKRLMEVYKGETLSITVTGHSLGAALALLVADEISTCGADVPPVAVISFGGPRVGNKAFKDRLAAQNVKVLRIVNSQDVITRVPGMFMSEEVEQKLSSSKIGETIENMGFGYTHVGVELLVDTKMSPYLKPDADMACCHDLEAYLHLVDGYLASNCPFRSNAKRSLRRLMQDQTSNMKKLYTSKAKALSVNLVKQGSFSMPSSS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1177 526 Gene3D alpha/beta hydrolase 138 522 IPR029058 -
Lele55g1177 526 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 46 508 - -
Lele55g1177 526 SUPERFAMILY alpha/beta-Hydrolases 229 472 IPR029058 -
Lele55g1177 526 CDD Lipase_3 196 471 - -
Lele55g1177 526 Pfam Lipase (class 3) 257 408 IPR002921 GO:0006629
Lele55g1177 526 MobiDBLite consensus disorder prediction 66 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1177 Lele-ChrLele55 18403073 18404653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1177 14 526 Acyl Lipid Metabolism Gene Families AT4G16820 56.107 0.0 545
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1177 55 18403073 18404653 Lele49g0476 49 2841410 2843437 CCT
Lele55g1177 55 18403073 18404653 Lele50g0508 50 3020865 3025865 CCT
Lele55g1177 55 18403073 18404653 Lele51g0492 51 2888962 2896415 CCT
Lele55g1177 55 18403073 18404653 Lele52g0509 52 3092844 3097837 CCT
Lele53g0313 53 2624880 2626457 Lele55g1177 55 18403073 18404653 hybridization
Lele54g0309 54 2632903 2634486 Lele55g1177 55 18403073 18404653 hybridization