Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1175 ATGAAACGAGCGCAGAACACCGAGCGAATGAACATATCTCTTATTCTCCTCCGCGAGATCCCAACATCGACGACTAACAGCTCATCGGAGTTTTTTGTCTCCCCGTTTCATTCTGTTGTAATTCTTTTAAAGGAAGACAACATGTGCCGTCAAAATTCTCCTGTACATCATTCTACCGAGGAAGACACTGCAGCTGATGAGAGCCTTCTAATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTTCTCTTCATAATCCTTCATTTCTCAGAAGATGTCTGCGCTACAAATTACGAGCAAGGCATAAAAAGAGGTTAAGAGCTGGAGTTGTGATCTTCAATTATAGGGACTGTTACAACATGATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGTGCAACCTTTAAGGGTTTGCGATTTCATCTTTGTGCATCACATGATCTCTTCAACTTTGAGTTTTGGGTGACTGAAGACTATCAAGCAGTGAACGTCTCGGTGAAGATTGATATATTGAGACCAGAGAATGTCACTGATGGAATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCCTCGACAATGTAGACACAAAGAATCTAATCGAAATGATAAGCGTGCTAATATACAGTTTCTGGAGTTGGATTCAACCATGCTGGCTACAGAAGGCATGCAGAATGGTTGTCAAGAGAAGTACCATGACACCCTGCCCGGCAAAGGTGGGAACTTGTCCAAGATATCTCTCGGTCAGAAAGAATTGCAGACTGGAAGACAGGATGGAGAAAAATATGGTCCTCATCATCCTGGTACTACAGATTACTTGGAACATGTTGCTTCTAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCACAAACTTCTAGGGACCCTGAATGCAATAAATCAGTGTCTAGATGCGATACTGCTTTGCCTGCCAAGACAAGGAAGTTGAACATGGATCGTTCAGACTCAAGAAATCGTATGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAACAAGTGTTATCAGATCGAGACAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGACCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAATTCATTTGTGAGGAAGCAAAGCGTGCTGGCAGATGGTCATGTTCCCTGGGCTTGTGAGGCCTTTTCCAAGCTTCATGGAAAGGAGCTGATCTCATCTCCCGCATTATTTTGGTGTTGGAGGATATTTATGATTAAACTTTGGAATCATGGCCTTCTTGATGCTTCCACAATGAACAACTGCAGTATAATTATTGATAGTTTCAGAAACGAGGGCTCCGATGAGAGCAAAAATTGA 1440 0.425 MKRAQNTERMNISLILLREIPTSTTNSSSEFFVSPFHSVVILLKEDNMCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRCLRYKLRARHKKRLRAGVVIFNYRDCYNMIRKTEVTEDFSCPFCLMQCATFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKIDILRPENVTDGINPQSQTFFFCARPRQCRHKESNRNDKRANIQFLELDSTMLATEGMQNGCQEKYHDTLPGKGGNLSKISLGQKELQTGRQDGEKYGPHHPGTTDYLEHVASSFNIPGVPIAMPQTSRDPECNKSVSRCDTALPAKTRKLNMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQSVLADGHVPWACEAFSKLHGKELISSPALFWCWRIFMIKLWNHGLLDASTMNNCSIIIDSFRNEGSDESKN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1175 479 Pfam VEFS-Box of polycomb protein 329 464 IPR019135 -
Lele55g1175 479 PANTHER POLYCOMB GROUP PROTEIN 56 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1175 Lele-ChrLele55 18366054 18377416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1175 108 470 C2H2 Transcription Factor Family AT5G51230 53.719 5.11e-115 350