Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1174 ATGACCATTTTATCATGGTTGGTAGATTGCAATGTTATCAAGGAGAGTGAACACGTCACCTACTCGAATGAAATAAAGGGAAGTACAGCTAAGAGAGGAAGTATTGCCAGAGGTGGAATTATCTGCAGCTGTTGCCAGAGGGAATATTCTGTGTGGGCCTTTGAGAAACATTGTGGAAGTGATCTTAAACAGCCCTATGAACATATTTACCTCCTTGAAAAACAAACATCTCTTCTGGAGTCCATGACGATTGCTTGGCAGGCGAACAAGGAACTGAAACACCAGGAAACACATTCGTTTGTACCTAAAAGAAATGCCAGATACAAAGATGATTATGCTTGTCCTGTTTGCGGAGATGGGGGAGACTTGATCTGCTGTGACAACAATTGCCCCTCCACATATCATTTAAACTGTTTGAATTTGGAGGGGCTTCCTCAAGTTGAATGGGGATGCTTTAAGGAATTTGAGAAAGAAGCTCTTAAAGATGCCTTAGGCCCTGACTGTTCGAGATTATATTGTGGGCAAAGTTGTAGAAAGTTAACAGATGCACAGGCCTTAACGTGGTTCAAAGTGTACTATACAGTCTTGGGTAAGCACATTGACTGCATTTTTCCACACTGTCAAACTTACCGAGAGTTAATTATAAGCCGTTTCTATACATTTATACTGGAAAAAGATGATGAGATTGTCTCTGCTGCTTCTGTGAGGTCGATAACTTTCTCCTTCTTTCTCTCCTGCAAGAAGTTCCACTCCCTTATTCTTCACTATCTTCCCCTTCTTCTACAGATGGCTGCGACAAAAAAGGAAGATAGACCTGAAAATAATCCTGTTGGCCGAACCCTTCTAGACCTCAACATGCCCCTCGATCTGCTTAGGAATAATGATTATGCTGGATGA 897 0.4169 MTILSWLVDCNVIKESEHVTYSNEIKGSTAKRGSIARGGIICSCCQREYSVWAFEKHCGSDLKQPYEHIYLLEKQTSLLESMTIAWQANKELKHQETHSFVPKRNARYKDDYACPVCGDGGDLICCDNNCPSTYHLNCLNLEGLPQVEWGCFKEFEKEALKDALGPDCSRLYCGQSCRKLTDAQALTWFKVYYTVLGKHIDCIFPHCQTYRELIISRFYTFILEKDDEIVSAASVRSITFSFFLSCKKFHSLILHYLPLLLQMAATKKEDRPENNPVGRTLLDLNMPLDLLRNNDYAG 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1174 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 199 IPR013083 -
Lele55g1174 298 SUPERFAMILY FYVE/PHD zinc finger 107 153 IPR011011 -
Lele55g1174 298 SMART PHD_3 113 155 IPR001965 -
Lele55g1174 298 Pfam Tify domain binding domain 33 82 IPR032308 -
Lele55g1174 298 PANTHER PHD FINGER PROTEIN 12 201 236 IPR042163 GO:0003714|GO:0045892
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele55g1174 Lele-ChrLele55 18361127 18365068 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1174 2 151 PHD Transcription Factor Family AT1G05380 40.667 1.91e-28 113