Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1125 ATGTCGGATTACAGAGACGAAGATCCTCGTATCCATGGCATCAGAAACAAGATTCGTGTCGTCCCCAATTTTCCCAAACCCGGTATTATGTTCCAAGACATCACAACTTTATTGCTCGATCCAAAAGCCTTCAAGGACACAATCGATTTGTTCGTTGAACGGTATAAAGGCCAGAACATCTCCGTTGTTGCAGTGCCTCATTTATTCTCTGTTCTCGTCGTGTTGATTCCCTTTCTTTGTTCTGATCTCTTCTCTGATGTCATCACACTTGTTCAAATTCAAATCCCTCTCCCTGCACCGTCCAATATACTATTCCCACTTCATGTTGTTTCTAATGCCTGTGACTGAATAGAAGCTCGAGGATTTATATTCGGCCCGCCCATTGCACTCGCCATAGGGGCCAAGTTTGTTCCCATGAGGAAACCCAAGAAGTTGCCTGGGAAAGTGATATCTCAAGATTACACATTGGAGTATGGACGAGATCGTATGGAGATGCATGTCGGAGCAGTGGAAGTCGGCGACCGAGCTCTGGTGGTCGACGATTTGATTGCAACCGGTGGAACTCTATGTGCAGCCATGGATTTATTAGAACGCGTCGGAGCAGAAGTGGTCGAATGCGCATGCGTGATTGAATTACCAGAATTGAAGGGACGTGAGAGATTGAATGGCAAGCCTTTGTATGTGTTGCTGGAGTATTGTCATGATGCTTGA 711 0.4585 MSDYRDEDPRIHGIRNKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGQNISVVAVPHLFSVLVVLIPFLCSDLFSDVITLVQIQIPLPAPSNILFPLHVVSNACDXIEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISQDYTLEYGRDRMEMHVGAVEVGDRALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLLEYCHDA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1125 236 FunFam Adenine phosphoribosyltransferase 83 235 - -
Lele55g1125 236 Pfam Phosphoribosyl transferase domain 117 217 IPR000836 -
Lele55g1125 236 Gene3D - 113 233 IPR029057 -
Lele55g1125 236 CDD PRTases_typeI 117 231 IPR000836 -
Lele55g1125 236 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 6 64 - -
Lele55g1125 236 SUPERFAMILY PRTase-like 13 225 IPR029057 -
Lele55g1125 236 Hamap Adenine phosphoribosyltransferase [apt]. 14 232 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lele55g1125 236 Gene3D - 2 73 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1125 Lele-ChrLele55 17636076 17639627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1125 7 231 PRT Gene Family AT1G27450 58.222 4.36e-85 249