Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1119 ATGTCATCGTCTTCTTCTACTGCTACTACTACTACGGTCTCTACCTTATCTCAGCTGGACCACTTCCCTCCTCCTTCTTCCGACCAGCTTTGTTATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACGAGCTTGTTCAAGACAGTGACTGTGCGATGCGGGCATTGCACCAACCTTCTTCCAGTAATAGTGAACATGAGAGGATTGCTTCTCCCATCATTACCAAATCATCAATTTCACCTCTCTAACTCTTTCTTCTCTCCTCCTCCGTCTCTTAACTTCCTGGAGGAGATGCCAAACTCATCAAATCACTACTTCTCTACTGTGCCTCCCACTACTCCTAGGGTTGCAGCAGCTGATGAGCTTCCACGCCCACCACTCATAAACAGACCACCTGAGAAGAGGCAGAGAGTCCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGCATTAAGTCTGCAAATCCTGATATTACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATACACTATGGTCTCATGCCTGATCAGAGTGTGAAGAAGACAAATGTGTGCCAGCAGGTAACTTATTATGCACCCCTCTTTCTTCTTCCTGCCCTTTGCTGCAGACAACACAATAATAATAATAATAATAATGCATTCTTATGGCACAGCGCCTGA 708 0.4718 MSSSSSTATTTTVSTLSQLDHFPPPSSDQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVIVNMRGLLLPSLPNHQFHLSNSFFSPPPSLNFLEEMPNSSNHYFSTVPPTTPRVAAADELPRPPLINRPPEKRQRVPSAYNRFIKDEIQRIKSANPDITHREAFSAAAKNWAHFPHIHYGLMPDQSVKKTNVCQQVTYYAPLFLLPALCCRQHNNNNNNNAFLWHSA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1119 235 Gene3D High mobility group box domain 134 185 IPR036910 -
Lele55g1119 235 Pfam YABBY protein 26 189 IPR006780 GO:0007275
Lele55g1119 235 CDD HMG-box 143 179 - -
Lele55g1119 235 SUPERFAMILY HMG-box 133 183 IPR036910 -
Lele55g1119 235 PANTHER PROTEIN YABBY 6-RELATED 5 199 IPR006780 GO:0007275
Lele55g1119 235 FunFam Axial regulator YABBY 134 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1119 Lele-ChrLele55 17531870 17534439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1119 37 203 C2C2-YABBY Transcription Factor Family AT4G00180 58.730 3.04e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele55g1119 YABBY 3.5e-68 CL0114