Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1112 ATGGCGAGACTTGGGATTTCTTTGTTATTACTGCTAGACCTCCTCATTTACACACCAGAATCCGCCATAGCCAAACCTTCAAACCCAACAGATTTCATAAAGTCCTCTTGCAGAGCCACGCGCTACCCTGTTCTATGCGTTCAGTCCCTATCAAGCTACGCAAGCGTGATTCATCAAAGCCAGAGACAAATAGCCATCACTGCTCTCTCCGTCAGCATCTCAAGAACTCGATCATGTTCCTTCTTCGTCCACAACCTTGGCCAAGCAACAAGAATAAAAAACCCCAGAGAACACAGAGCTGTTCAAGACTGCATAGAGAACATGGCTGATAGCTTTGACCGGCTTCACCAATCGGTTCAGGAGCTGGGCCGAACCGGTCGGGCCGTTGGTCAGGATTTTGAGTGGCATATGAGCAATGTTCAGACTTGGGTTAGTGCTGCTCTTACAGATCAAGACACATGTCTCGATGGGTTCTCCGGTTCTGGTTCAGATGAAAACCTTAAGGCTGATATTAGGAAGAGAGTTTTGAATGTTGCTCAAGTTACTAGTAATGCTCTTGCTTTGGTTAATCGCTTCGCTTCAAGGCATCGTAGTTAA 597 0.4657 MARLGISLLLLLDLLIYTPESAIAKPSNPTDFIKSSCRATRYPVLCVQSLSSYASVIHQSQRQIAITALSVSISRTRSCSFFVHNLGQATRIKNPREHRAVQDCIENMADSFDRLHQSVQELGRTGRAVGQDFEWHMSNVQTWVSAALTDQDTCLDGFSGSGSDENLKADIRKRVLNVAQVTSNALALVNRFASRHRS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1112 198 CDD PMEI-like_3 35 194 - -
Lele55g1112 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 190 IPR006501 GO:0004857
Lele55g1112 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 192 IPR035513 -
Lele55g1112 198 FunFam Pectin methylesterase inhibitor 1 28 192 - -
Lele55g1112 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 188 - -
Lele55g1112 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Lele55g1112 198 Pfam Plant invertase/pectin methylesterase inhibitor 31 188 IPR006501 GO:0004857
Lele55g1112 198 SMART PMEI_2 28 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1112 Lele-ChrLele55 17375722 17376318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1112 33 189 Carbohydrate Esterase AT3G14310 31.210 1.28e-24 98.6