Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1094 ATGAATTCTGTTCATTTCCTGGTTTCTTCTCTGTTTCTTCTCCTGCTTGTATTTCCTTGTCTGCAATCTGTTCGAGGAAATGCGGAGCTGAGAGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGGCAAGGTACTTGGTTCTTGGACCAGTGATGGTGAGCCGTGTAGTGGTTTGTTTGAAGGGATAGCATGCAACGAACACAGGAAAGTGGCAAACATTTCGTTACAGGGAAAGGGGCTCTCAGGATTGCTCTCTCCAGCTGTGGCTGAACTCAAATGTTTGTCTGGTTTATACTTGCACTACAACAATCTCTCTGGAGAGATCCCCAGAGAGATTTCAAATCTCACTGATTTGGTTGATCTCTATCTTGACTTTAATAATCTTACTGGAAACATACCTCCTGAGCTAGGCAACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAACCAACTTTTGGGAACTATACCGAAAGAGATGGGCTCCTTGAAGCAGCTTACTGCCTTAGAATTGCAATGTAACAAATTAAGTGGTACAATTCCTCTCAGCTTGGGGAATTTGGAGAAGCTAAGGATGCTAAATCTGAGCTTTAACAGCTTCAATGGCTCAATCCCTGCAACACTTGCCGATCTTGCAAATTTTCAAGTTCTTGATATTCGAAACAATTCTCTATCAGGAAGAGTTCCTTCTGCTTTGAGGACATTGAGGGAAGGATTCCAATGTGCAAATAACCGGGATTTATGTGGACATGGGTTTTCTACTTTGAAAGCTTGCATCAATGATCCAACTTTAAACCCTAGCCAGATTGACACCTCAAATCCAACAACAAAAGAAGGCATTCCTCATGCAAAGGATTTTCCTGAACCCGCGAATTTTCAGCTCCATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTCCCTCAAGCACTCATTGCAGCAAGTGTTATAACTATCATAATCACATTCATATGTGCTGGACTTTTCACTTTTCTCAGATACCGCCGCCAGAAGCAAAGAATCACAAATTCATCAGAATCTTCTGAAGGGAAACTCAGTCCTGATCAGCCTAAAGAAATTTACAAAAGAAGTCCATCGCCACTCGTTAATCTTAACTACTATAATGGATGGGATCCAAATCCAATGGCTGATGCTCAAAATGGAAACAGATTATCCCATGAGTATCTAAACCGTTATAGGTTTAATGTGGATGAGATTGAATCTGCTACACATTACTTCTCTGAAACTAACTTATTAAGCAAGAGCAAATTATCAGCAGTTTACAAAGGAGTTCTCAGGGATGGCTCATTTGTGGCTATAAGAAGCATTAACGTGACATGTTGTAAGACTGAGGAAGATGAATTTGTAAATGGGTTGAACTTAGTACTTTCGTTGAGACATGAAAACCTAGTTAGGCTCAGAGGTTTCTGTTGCTCTGCAAGTAGAGGTGAATGTTTCCTTGTCTATGACTTTGCCCCTAAGGGTTACTTGTCTCAATACCTTGACATGGAAGATGGAAGTGGTCAAGTTCTTGATTGGTCCAAGAGGGTTTCTATCATCAAGGGCATCTCAAAAGGTATTGGATATCTACACAACAATGAAACAAACAAGCCAACAATGGTACACCAAAACATTTCAGTTGAAAAAGTTGTCCTTGACCATCAATTCAACCCCTTGATTATGGATTCTGGCCTCCCAAAACTTCTAGCAGACGATGCTGTTTTCTCAGCTCTGAAAGTAAGTGCTGCCATGGGATACTTGGCTCCAGAATACATCATTACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCAATTGAATCTTTCAGATTTGAAGAGTTTGTTGATTCAAATCTGAAGGGACGATATGTGAAATCTGAAGCAGCAATGCTGGCGAAGCTTGCAGTGATGTGTACTCATGAGCTTCCTGAACAGAGGCCAACTACGGCGGAAGTGATTCATCAGCTGAAGGCATTTCCTTCTCAACAACATACTTGA 2070 0.4106 MNSVHFLVSSLFLLLLVFPCLQSVRGNAELRALMELKSSLDPEGKVLGSWTSDGEPCSGLFEGIACNEHRKVANISLQGKGLSGLLSPAVAELKCLSGLYLHYNNLSGEIPREISNLTDLVDLYLDFNNLTGNIPPELGNMPNLQVLQLGYNQLLGTIPKEMGSLKQLTALELQCNKLSGTIPLSLGNLEKLRMLNLSFNSFNGSIPATLADLANFQVLDIRNNSLSGRVPSALRTLREGFQCANNRDLCGHGFSTLKACINDPTLNPSQIDTSNPTTKEGIPHAKDFPEPANFQLHCNQTHCSKSRMFPQALIAASVITIIITFICAGLFTFLRYRRQKQRITNSSESSEGKLSPDQPKEIYKRSPSPLVNLNYYNGWDPNPMADAQNGNRLSHEYLNRYRFNVDEIESATHYFSETNLLSKSKLSAVYKGVLRDGSFVAIRSINVTCCKTEEDEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGYLSQYLDMEDGSGQVLDWSKRVSIIKGISKGIGYLHNNETNKPTMVHQNISVEKVVLDHQFNPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYIITGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAIESFRFEEFVDSNLKGRYVKSEAAMLAKLAVMCTHELPEQRPTTAEVIHQLKAFPSQQHT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1094 689 Gene3D Ribonuclease Inhibitor 142 260 IPR032675 -
Lele55g1094 689 ProSiteProfiles Protein kinase domain profile. 415 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1094 689 FunFam Protein NSP-INTERACTING KINASE 2 494 684 - -
Lele55g1094 689 Pfam Protein tyrosine and serine/threonine kinase 421 680 IPR001245 GO:0004672|GO:0006468
Lele55g1094 689 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Lele55g1094 689 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Lele55g1094 689 FunFam Protein NSP-INTERACTING KINASE 2 386 493 - -
Lele55g1094 689 MobiDBLite consensus disorder prediction 342 365 - -
Lele55g1094 689 FunFam Protein NSP-INTERACTING KINASE 2 26 175 - -
Lele55g1094 689 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Lele55g1094 689 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lele55g1094 689 PANTHER LEUCINE RICH REPEAT KINASE 2 66 155 - -
Lele55g1094 689 Gene3D Phosphorylase Kinase; domain 1 383 493 - -
Lele55g1094 689 SUPERFAMILY L domain-like 29 237 - -
Lele55g1094 689 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1094 Lele-ChrLele55 16826593 16831038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1094 7 528 Miscellaneous Gene Families AT4G22730 56.691 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele55g1094 PK_Tyr_Ser-Thr 8.4e-31 CL0016