Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1086 ATGGATCTGAGATATCATTCCAATTGTGAATGGGTTGCAGGCTCCGTTGGTACTAATTTTACACCTCATATCATTACCATTAATTCTGTGGAGGACATCACTATGAAGATTATATCATTTTCTCAGCAGGGGCCACGATCTATATGCATTCTTTCTTCAAGTGGAGTCATATCAAGTGTCACGCTTCGGCAGGCTGATTCTTCTGGGGGTACATTGACGTATGAGGGACGGTTTGAAATTTTGTCATTATCCGGCTCATTCATGCTGAAAGAAAGTGCTGGAACACAAAGCAGATCGGGTGGCATGAGCGTTTCTTTAGTGAGTCCAGATGGACGTGTCATAGGGGGTAGTGTAGCTGTTTACTTTCTCTGTGACAGTGAAGTTGAAAGAGAGCTTGGATTATTGTTTTCTAAAGGAGGTGACTGGAGATCTTGGATTGAAAATCAGTCCAAGTCCAAACAAACAAGGGATGAGACAAAATTTACAATGCTTGTGGAAGATATTAGAGAAGGAGTGCTGGTTTTTAAAGATGAAAACGAAGCAGTAAGGTACTATGTCTTGTTACAGGGAGGAGGTCAAGGTTGTGAAGGCATGGTTGAGATAGAAGCCTCATCGGTATAG 621 0.4203 MDLRYHSNCEWVAGSVGTNFTPHIITINSVEDITMKIISFSQQGPRSICILSSSGVISSVTLRQADSSGGTLTYEGRFEILSLSGSFMLKESAGTQSRSGGMSVSLVSPDGRVIGGSVAVYFLCDSEVERELGLLFSKGGDWRSWIENQSKSKQTRDETKFTMLVEDIREGVLVFKDENEAVRYYVLLQGGGQGCEGMVEIEASSV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1086 206 CDD DUF296 21 119 IPR005175 -
Lele55g1086 206 Pfam Plants and Prokaryotes Conserved (PCC) domain 22 119 IPR005175 -
Lele55g1086 206 SUPERFAMILY AF0104/ALDC/Ptd012-like 19 123 - -
Lele55g1086 206 ProSiteProfiles PPC domain profile profile. 17 138 IPR005175 -
Lele55g1086 206 Gene3D - 22 129 - -
Lele55g1086 206 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 134 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1086 Lele-ChrLele55 16417127 16421967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1086 4 157 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.658 2.14e-60 191