Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1076 ATGGCTCGTTTTAATTTTGGTGAAACGCTATCGTTTGGAGGTTCAAGCCATGGACTGGGCAAACTAATTGTTCCGTTTCAGACCCCTACGAGCTCGTTAAGGGTCTTTCTTCTACATGGAAGCTTAGAAATATTCGTGAAAGAGGCCAAAAACCTTCCAAATATAGATATGGTCCATCAGAAAATGGGGGATATGCTTTCCAGATTACCGGGAAAACTTGGCCAAAAAATTGAAAAGCATATGTCAAATACAATCGTTACTAGTGATCCATACGTGACTGTATCTCTTGCGGGTGCTGTAATTGCAAGAACATTTGTGATCGAGAACGATGAGAACCCTAATTGGATGCAGCATTTCAATGTTCCCGTAGCTCATTATGCTTCAGAAGTACATTTTGTGGTAAAAGATAGTGATATTGTGGGCTCACAAGTCATGGGTGTGGTTGGAATTCCTTTGGAACAGTTATACACAGGCTCAAAAGTTGAAGGGTCCTTTCCAATCCTTAATTCTAGCGGGAAACCTTGCAAAGATGGAGCAGTTTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCTCTTTATGGTCATGGAATAAGGGCAGGTCCTAGTTATGAAGGGGTTCCAGGTACATACTTTCCTCTTAGGAAGGGTGGTCGAGTTAGACTTTATCAAGATGCTCATGTTCATGGAGGTTCCCTTCTTCCACCTAATTTGAAGATGGAAGGTGGGGTGAGTTATGAGCATGGCAATTGTTGGCGTGACATCTATGAGGCGATAAGTCAGGCCCGGCGATTAGTATACATTGTGGGGTGGTCTGTGTACTACAATGTTAGACTGGTTCGAGATGCTGGTGACGCTAAAGCTTGCACTTTAGGTGATCTTCTCAAAATCAAATCACAGGAAGGTGTGAGAGTGATGCTACTTGTGTGGGACGATCCTACTTCCAGAAGCATGATAGGTGGATATAAAACGGTAAAGAACTTTAAACTATGTTTCAATTTACTTATTTGGTAG 1020 0.4186 MARFNFGETLSFGGSSHGLGKLIVPFQTPTSSLRVFLLHGSLEIFVKEAKNLPNIDMVHQKMGDMLSRLPGKLGQKIEKHMSNTIVTSDPYVTVSLAGAVIARTFVIENDENPNWMQHFNVPVAHYASEVHFVVKDSDIVGSQVMGVVGIPLEQLYTGSKVEGSFPILNSSGKPCKDGAVLSLSIQYIPFDKVALYGHGIRAGPSYEGVPGTYFPLRKGGRVRLYQDAHVHGGSLLPPNLKMEGGVSYEHGNCWRDIYEAISQARRLVYIVGWSVYYNVRLVRDAGDAKACTLGDLLKIKSQEGVRVMLLVWDDPTSRSMIGGYKTVKNFKLCFNLLIW 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1076 339 Pfam C2 domain 40 167 IPR000008 -
Lele55g1076 339 ProSiteProfiles C2 domain profile. 18 165 IPR000008 -
Lele55g1076 339 SMART C2_3c 41 164 IPR000008 -
Lele55g1076 339 Gene3D C2 domain 30 186 IPR035892 -
Lele55g1076 339 CDD C2_plant_PLD 35 188 - -
Lele55g1076 339 PANTHER PHOSPHOLIPASE D 32 321 IPR015679 -
Lele55g1076 339 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 190 IPR035892 -
Lele55g1076 339 SUPERFAMILY Phospholipase D/nuclease 213 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1076 Lele-ChrLele55 15766981 15768438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1076 32 326 Phospholipase D Gene Family (Wang group) AT2G42010 65.878 2.14e-135 410