Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele55g1055 | ATGGGCAAGGCATCCAAATGGTTTCGCTCTGTTTTTAGTCTCAAGAAGTCAGACTCTTCGACTTCACCGGCGCCGTCTCCGTCGACTTTACCCCCTGGCTCAGCTTCAAAACCACTCAAAGACAAAATCCGGTGGAGCTTCGTCAAGTCTTACAAAGAATCCGGCACTACTAAATCCTCCGACGTTCACCACACAGCGTTCAGAGAGGAAGCGGTTCCCTTGTCCGGACACATTGACGGCGTGTACCCCGGTAAGCACGCAATGACTGTTGCTGCTGCTAAGGCTGCTGTCGCGGAAGCGGCGGTCGCTGCTGCTCAGGCCGCTGCCACTGTTGTCAGGCTTACGAGCAGCGGCCAGTGCCCTGGGAGCTTCGGGACTCGGGAGGAATGGGCGGCCATCAAGATTCAAGCTGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTACGGGCATTGAAAGGATTGGTGAAGCTTCAGGCATTGGTGAGAGGTCATATTGATAGGAAGCGAACGGCGGAGTGGTTGCATCGAGTACATGCAATTGTTCGAGTACAGTCACGTGTCCGGGCAGGGCGAGCCCAAATTCTGCAGACACCATTTTCAAATTCTAAGTCATCTAAAGCAGACTACAATGGTCCAGCAACACCAGACAAATTTGAAAGCCCGATCAGATCAACGAGCATGAAATTTGATCATTCATCATCACTCAAGAGAAATGTGTCCAAGACCCGTGTTCAGATCCATGGTGAGAATCAAGATACATGTTGGGATGATAAAAGTGACAGGATTCTCGAGATTGATTCTGGAAAACAACACTTCACTACACCGAAATGCAGAAGTCTCTTTCACTCCATTAACTATCCTTCAGTATGTGATAATCAGAGCCAAAGTTTCTCTACTACAAAGGACTCCAAAAGTCATCAATCAGGTCACAGCAGGTCTTCGTACGACGAAGGCGTTGTCGATAGTCCTCAACTCTTTTCTGTCTTCGCAAGGGACTATGGCCTAAAGAATAGTGGTAGTCCTTTTACTCCTAGCAGAAGTGACGACTCGAGAAGCTATCTGAGTTCTTATTCTAACTACCCAAGCTACATGGCTTACACTGAATCCTCAAAAGCAAAGGTCAGATCAATGAGTGCTCCAAAGCAAAGGCCTCATCAATATGAGAGGTCTAGTTCATCTAGTAGGTATTCAGTTCAAGGATTGACAACACAGAAAGCAAATGCATTGCAAGTAAACTTCACTAGCAAAGCCTATCCGGGTTCTGGTCGTTTGGACAAGTTTGGTATGCCAGTGGGATATAGATACTGA | 1308 | 0.4778 | MGKASKWFRSVFSLKKSDSSTSPAPSPSTLPPGSASKPLKDKIRWSFVKSYKESGTTKSSDVHHTAFREEAVPLSGHIDGVYPGKHAMTVAAAKAAVAEAAVAAAQAAATVVRLTSSGQCPGSFGTREEWAAIKIQAAFRGCLARRALRALKGLVKLQALVRGHIDRKRTAEWLHRVHAIVRVQSRVRAGRAQILQTPFSNSKSSKADYNGPATPDKFESPIRSTSMKFDHSSSLKRNVSKTRVQIHGENQDTCWDDKSDRILEIDSGKQHFTTPKCRSLFHSINYPSVCDNQSQSFSTTKDSKSHQSGHSRSSYDEGVVDSPQLFSVFARDYGLKNSGSPFTPSRSDDSRSYLSSYSNYPSYMAYTESSKAKVRSMSAPKQRPHQYERSSSSSRYSVQGLTTQKANALQVNFTSKAYPGSGRLDKFGMPVGYRY | 435 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 219 | 234 | - | - | |
| Lele55g1055 | 435 | Pfam | IQ calmodulin-binding motif | 130 | 149 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | Pfam | IQ calmodulin-binding motif | 155 | 169 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 372 | 397 | - | - | |
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 293 | 318 | - | - | |
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 383 | 397 | - | - | |
| Lele55g1055 | 435 | Gene3D | - | 129 | 171 | - | - | |
| Lele55g1055 | 435 | ProSiteProfiles | IQ motif profile. | 128 | 156 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | ProSiteProfiles | IQ motif profile. | 152 | 179 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 14 | 38 | - | - | |
| Lele55g1055 | 435 | Pfam | Protein of unknown function (DUF4005) | 337 | 401 | IPR025064 | - | |
| Lele55g1055 | 435 | SMART | iq_5 | 127 | 149 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | SMART | iq_5 | 150 | 171 | IPR000048 | GO:0005515 | |
| Lele55g1055 | 435 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 399 | - | - | |
| Lele55g1055 | 435 | MobiDBLite | consensus disorder prediction | 201 | 234 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele55g1055 | Lele-ChrLele55 | 11582840 | 11586705 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele55g1055 | 129 | 435 | IQD Protein Family | AT4G23060 | 43.505 | 4.37e-60 | 201 |