Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1045 ATGAGGTTATGGAGTTCATTGTTGTTTATCGGTCTGATTTCCACTTTCTCTTTTGTGGCTTGTGATAATGCTGTGGCATCCAAAGAAGTTTTGTTGCTTAATGCTTTCAAAGAAGCTATTTATGAAGATCCATTTCAAGTTTTGTTCAATTGGAATACGATGGATTCAGATCCTTGTGACTGGGATGGCGTTTTCTGCAATCCGGTCCGAGATCATGTTGTTAAGATAAACATTTCGAGATCATCATTAAAGGGATTTCTAGCTCCAGAATTGGGACGAATCACGTACTTGGAAGAATTGATTTTGCACGGCAATAAACTTATTGGAACAATACCTAAAGAGCTGGGCATGTTGAAATCTCTTAAGGTCTTGGATTTGGGGATGAATCGGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTCAACCCAATTAGTTAAAATAAACCTGCAGTCCAACGGGTTGACTGGCAGACTACCTCCAGATCTTGGAAATTTGAAATACCTTCAAGAACTAAGACTGGATAGGAATAAGCTTCAAGGGCATGTGCCTGCTGACAGCAGTTCCGATTTTACTACAAATATGCGTGGAATGTATGCATCTAATGCAAATTTACCTGGTTTCTGTCGTTCATCTCAGTTGAAAGTAGCAGATTTTTCCTATAACTTCTTTGTTGGTAGCATCCCTAAATGTTTGGGGTATCTTCCAAGGTCTAGCTTTCAAGGGAATTGCCTCCAGATCAAGGATTTAAAGCAACGCCCTTCTGTGCAATGTGCTGGTGCTTCACCTGCCAGGGGCCATCCAGTAATAAACCCAAAGCACCGATCAGCTGATTATTTGTCCAAGCATCAAGGAGAATCAAAACCTACTTGGCTTTTGGCTCTAGAAATAGTGACAGGAACCATGATTGGTTCTCTCTTTTTAGTTGCTCTTCTAACTGCTTTTCAGTGGTTTAACAACAAATCGTCTATCATTATTCCTTGGAAGAAATCTGCAAGCGAGAAGGATAATTTGACAGTATATATAGACTCTGAGATGCTGAAAGATATAAGGAAGTATAGCAGACAAGAGCTCGAAGTGGCTTGTGAAGATTTCAGCAACATCATTGGGTCCTCACCTGACAGTGTGGTCTACAAGGGCACCATTAAAGGTGGGTCCGAGATTGCCGTAATTTCCCTTTGCATTAAGGAGGAGAATTGGACAGGTTACCTCGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCGAGGCTAAAACATGAGAATATAGGAAAGCTACTAGGTTATTGTAAAGAGAGCGCTCCATTTACAAGGATGCTGGTTTTTGGATATGCTTCAAATGGGACACTTTCAGACCACCTACATTATGGAGAAGGATGCCAGTTATCATGGACAAGGCGTATGAATATTGTTATAGGCATTGCACGCGGTCTCAAATATCTACACTCAGAAGTTGAGCTTCCATTCACTATATCGGAGCTAAATTCTGGTGCTGTATACCTAACAGAAGATTTTGCCCCAAAGCTCGTTGATTTTGAAAGCTGGAAGACAATCCTGAAAAGATCAAAAAGAAATTCAGGTTCTGATGGCAGCCAAGGTGCCGTTTGTGTTCTTCGAAATTCCATTGAAGCTCGCCATCTTGATACCCAAGGAAACATATATGCTTTTGGGCTTCTTCTACTTGAGATAGTCAGCGGAAAATCTCCCTATTGCAAGGACAAGGGTTACTTCGTGGAATGGGCGAAGGACTATCTTGAAAATCCAGAAGAAATGCCATCTTTGGTGGATCCTGAATTGAAACATTTTAGAGATGAAGACCTGAAAGTAATATGGGAGGTAATAAATCTCTGTATCAATTCTGACCCCACAAGGCGTCCAGGGATGCAAGAGTTGTGTAGTATTCTGGAGAGCAGAATCGACACATCCATAACTTCGGAGCTCAAGGCATCATCTTTGGCTTGGGCTGAACTTGCACTCTCATCTTGA 1986 0.4154 MRLWSSLLFIGLISTFSFVACDNAVASKEVLLLNAFKEAIYEDPFQVLFNWNTMDSDPCDWDGVFCNPVRDHVVKINISRSSLKGFLAPELGRITYLEELILHGNKLIGTIPKELGMLKSLKVLDLGMNRLSGPIPPEIGNSTQLVKINLQSNGLTGRLPPDLGNLKYLQELRLDRNKLQGHVPADSSSDFTTNMRGMYASNANLPGFCRSSQLKVADFSYNFFVGSIPKCLGYLPRSSFQGNCLQIKDLKQRPSVQCAGASPARGHPVINPKHRSADYLSKHQGESKPTWLLALEIVTGTMIGSLFLVALLTAFQWFNNKSSIIIPWKKSASEKDNLTVYIDSEMLKDIRKYSRQELEVACEDFSNIIGSSPDSVVYKGTIKGGSEIAVISLCIKEENWTGYLELYFQREVADLARLKHENIGKLLGYCKESAPFTRMLVFGYASNGTLSDHLHYGEGCQLSWTRRMNIVIGIARGLKYLHSEVELPFTISELNSGAVYLTEDFAPKLVDFESWKTILKRSKRNSGSDGSQGAVCVLRNSIEARHLDTQGNIYAFGLLLLEIVSGKSPYCKDKGYFVEWAKDYLENPEEMPSLVDPELKHFRDEDLKVIWEVINLCINSDPTRRPGMQELCSILESRIDTSITSELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1045 661 SUPERFAMILY L domain-like 28 236 - -
Lele55g1045 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Lele55g1045 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1045 661 Pfam Protein tyrosine and serine/threonine kinase 367 634 IPR001245 GO:0004672|GO:0006468
Lele55g1045 661 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lele55g1045 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Lele55g1045 661 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Lele55g1045 661 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Lele55g1045 661 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lele55g1045 661 Gene3D Ribonuclease Inhibitor 142 258 IPR032675 -
Lele55g1045 661 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 189 - -
Lele55g1045 661 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Lele55g1045 661 PANTHER PROTEIN MALE DISCOVERER 2 19 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1045 Lele-ChrLele55 10778797 10783336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1045 42 640 Receptor kinase-like Gene Family AT5G45780 27.213 1.18e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele55g1045 PK_Tyr_Ser-Thr 2.8e-21 CL0016