Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele55g1039 | ATGAGCAGAAAAACAACGAAAACATCTGTGTGTTTTCCTGGGCATCCTGTATTGAGTTATGAATTCTGGGTGATTCCAATGGGGAAAGGTAGACCTAGGGCTGTGGAAAAAGGTGTAGCAGGGCAGAGTCTCAGTGTTTCATCGTCTGGGTCACTGAATATACCGTCAGCGCCTGTATATTTTCCCACCGAGGATGAGTTCACAGACCCCTTGGAATATATTTATAAGATTAGACCTGAAGCTGAGCCATATGGAATTTGCAAGATTGTACCTCCAAAGAGTTGGAAACCGCCATTTGCATTGGATCTAGATTTTTTTACTTTCCCCACTAAAACACAGGAAATTCACAAGTTACAGGCTCGTCCTGCTGCGTGTGACTCCAAGACTTTTGAGTTGGAGTACTCTAGGTTTTTAGAGGATCACTGTGGTAAAAAGTCAAGGAAGAAAATTTTATTTGAAGGGGAAGAACTGGACTTGTGCATACTGTTTAATTCTGTTAAGAGATTTGGTGGATATGATAAGGTTGTGAAGGAAAAGAAATGGGGGGATGTTTCAAGGTTTGTAAGGCCAGGAAGAAAAATGACAGACTGTGCAAAGCATGTCCTATCACAATTGTACTGTGAACATTTGTATGATTATGAGAATTTCTATAATCAACTGAATCAAGGGACAGGTAAGAAAGGCATGCTTGAGGGTGAAAAAAGTGAGCATTGTGTTCGGTCTTCAGGATCCAAGAGGATGAGAAGTTCTGATTGTTTGAAAGTTAAGGATTGTAAAGTGCAGGAGGAAGAACATGACCAGATTTGTGAGCAATGCAGAAGTGGTTTGCATGGGGATGTGATGCTTTTGTGTGATAGGTGTGATAAGGGCTGGCATATATATTGTCTTTCACCGCCCTTGAAGCAAATTCCTCCAGGAAACTGGTATTGCTTTAATTGCTTGAATTCTGACAGGGACAGCTTCGGTTTTGTGCCTGGTAAGCAGTACAACTTGGAAGCCTTTAGACGTGTAGCTGATCGGTCAAGGAGGAGATGGTTTGGACCAGGACCTGTTTCAAGGGTGCAAATGGAGAAGAAATTTTGGGATATTGTAGAGGGATCGGTTGGTGAGGTTGAGGTGATGTATGGAAGTGATCTGGATACGTCTGTCTTTGGAAGTGGTTTTCCACGCTCAACTGTTCAGAAACCAGAGTCAATTGATCCAAAATTATGGGATGAATACTCATCTAACCCATGGAATCTTAACAATTTGCCTAAGTTAAAAGGGTCAATGCTTCAAGCTGTTCATCATAATATCACTGGCGTGATGGTACCCTGGCTGTATATTGGGATGCTATTCTCATCCTTTTGCTGGCATTTTGAGGATCATTGCTTTTACTCAATAAATTATCTACACTGGGGAGAGCCAAAATGCTGGTACAGTGTTCCTGGTAGTGAAGCCGGTGCTTTTGAGAAGGTGATGAGAAGCAGTCTTCCTGATCTTTTCGATGCGCAACCAGATCTGCTTTTTCAGCTTGTAACTATGTTAAACCCATCTGTTTTGCAAGAAAATGGAGTTCCAGTCTACAGCATAATTCAGGAGCCTGGGAATTTTGTTATTACCTTTCCCAGATCATACCATGGAGGTTTTAATCTCGGCTTGATTGCATTGTCAGGTTTAAATTGCGCAGAGGCAGTTAATTTTGCCCCTGCTGACTGGCTACCTTATGGTGCATTTGGAGCTGATCTTTACCAACGATATCACAAAGCTGCTGTCTTGTCTCATGAGGAGCTTCTTTGCGTAGTAGCCCAGTACAGTGACATTGATTCCAGAGCATCTCCTTATTTGAAGAAAGAACTGCTTCGAATATCTGATAAAGATAAATCTTGGAGGGAAAAACTCTGGAAAAATGGTATTGTCAAAACATCTCGCATGGCTCCTCGGCAATGTCCTCAATATGTGGGAACTGAAGAGGATCCATCATGCATTATTTGCCAGCAATATCTATATCTTTCTGCTGTTGTGTGCAGTTGCAGGCCATCTTCTTTTGTATGCCTGGAGCACTGGGAACATCTTTGTGAGTGTAAAACTGTAAAACTACGTCTTCTATATCGTCACTCACTTGCAGAATTGTATGACTTGGTACTTTCTTTGGACAATTATACTTCTGAGGAGAAAGCATTTGGTAGGAGTATAAGAAAGAATTCTTCATGTCCGGCTACTTTGACAAAAAAGGTAAATGGTGGTTCCGTTAGTTTCTCACAGCTTGCTGCACAATGGCTTCTGCGATCTAGTGAGATTCTTCAGAATCCTTATTCAAGTGATGCTTTTGTTTCTGCACTAAGGGAAGCTGAACAGTTTCTATGGGCTGGTCCTGAGATGAATTCTGTTCGCGATATGGTGAAGAATTTGATCGAAGCTCAGAAGTGGGCAGCAGGGATAAGAGATTGTTTAAGAATAATTGAAGCCTGGTTGTGTGGTCAGGAATCTGACATTGAGAAAGTTCACTTAGAATTTGTTGATGAGCTCCTAACATTTAATTCTCCACCAAGCAATGAGCCTGCTTATCATAAGTTGAAGGAATATACAGAAGGGGCCATATTCTTAAGTCAGGAGATTAATATTGCTTTGTCAAAGTGTTCAAAGATCTCTGAGTTGGAATCTCTACATTCTAGAGCTTGTGCCTCTCCAATCTACGTGAAAGATGTGAAGTATTTGGAAAGGAAAATTTCTTCTACTAAGGCATGGCAGCATAGAGCTAGAAGCTGCATCTCAGTGAAACATCCTGCTGCAGTAGAGCTTGATGTTCTTTGCAAGTTGAAGTCGGAGATTATGGAGCTTCAAGTACAACTTCCAGAAATAGAAGTGATTCAGAATATATTAAGTCAAGCGGAATCTTGTAGTTCAAAATGTAGTGAGATATTACAAGGTCCCATGAATCTAAAGAATGTCGATTTGCTGCTTAAGGAATGGGACAGCTTTATGGTTGATGTACCAGAAGTGAAGCTTCTGAGGCAATATTATAAGGATGGTGTTTCATGGGTTTCCAACTTTAACCGTGTATTAGGGACAACACATGAACGCCATGATCAACATAAAGTTATTGATGAATTGAAGGGTATTTTAGATGATGGTTTATCTTTAAAAATTCAAGTTGATGAGTTGCCATTAGTTGAGACTGAGCTGCAGAAAGCTCTTTGTCGGGAAAAGGCTCAAAAGGCACATAAATCTAAGATGCCTCTGGAATTTGTTGAAGAAGTGATGAAGGAGGCCAGACTGCTGCAAATTGAGGGAGAGAAATTATTTGTTGGTTTATCCGGTGTGCTTGCTGTTGCCATACCTTGGGAGGAAAGGGCTAAAGAGATTCTTTCACATAAGGCTTCTTTCTCTGACTTTGAGGCCATGATCAGGACGTCAGAAACCATTTTTATGATTCTTCCTTCCCTTAATGATGTGAAGGAAGCACTATTGGAAGCTAATTCATGGTTAATGAATTCAAAACCATTCTTGGTTTCTTCTAGTTGTCCATCAGATTCTCTACGGAAAGTTGAGGACCTTCAGATGTTGGTTTCTCATTCGAAGCTTCTTAAAATATCTTTTGAAGAAATAAGGATACTTGAAACAGTTTTGCATAACTGCAAAGAATGGGAGTCTGAGGCATGTTCTGTATTGGAAGATGCCTGTCATATTTTTGAATTGGATGACATTGTTCATGGAATAAGCAGTGGCCTAATGTCCAGAGTTGAAGGTTTGATTGCCAGAATGCAGTCTACCACAAGATCTGCTTTATTGCTTGGTTTTGAGTTCGATGAGATTCCAAGACTTAAAGCAACTTGTTCTACACTGCTGTGGTGCAAAAAGATTCTTTCCTTCTGCAATCTTTCTCCTTCTTTAGAGGATGTTTTAGAGGCTACAGAACACCTTCCTCATTTGTGTGGTTCTGGGGCCCTATTGAATCTACTGATTGGTGGAGTCAAATGGCTTAGGCAAGCCTTGGAGGGAATTTCTGGACCACGCAATTCTGGAAGAAAGTCAAGTGAAGTTGAAGATATTATTAGAGATTACCAGACTATTAATATTCCTTTTGCAGCAATAATATACCAACTTGAAGAAGCCATAGGAAAACATAGGTTGTGGCAAGAACAGGCGCATCAATTCCTTAGCCTTTGTTCTGGGGAACGGTCTTGGTTATTGATGTTCAAACTCAAGGAACTAGGTGATAATGTTGCTTTCGGCTGCACGGAACTGGATTTGATTTTATCTGAAGTTGAGAAGGTGGAGGATTGGAAGAAACACTGCATGAATTTTATAGGAACTTTAGTCCAAAATGAGAATTCACTTCTTGCTGCTCTGCAGAAGATGAAACAGAGTCTAGATAGATCATTGTCCATATATGGGAAGTTGAATGACTGCAAGGAAGAATGTTTATGCTTTTACTGCTTTACTAATTCTGAAGATCAGGAATTTCTTACTTGCTCCACTTGTAGAAACTGCTATCATATACTGTGTCTTGGACCATTGGTGGACAATAGCCATGAAAATTATACATGTCGTTCCTGTAAAATATTAGAGGGTGAATCCAATTATAAGAAGGGAACTCTCCTCTTGGGGTTTGGGGAGAAGCGTGCTGAACTGAAAGTTCTTCGTGAACTTCTTTCTGATGCTAAAAATTTGTGTGTAAGAATTGATGAGACAGATGCTCTCAACGAACTTGTTGAGCAAGCACTACTATGCAGATCTTGCTTGAGAGAAGTGGTGAACTTTACATCAGCTAATGTAGACAGTGATCTTAGTATCATCTCTGAAAGATTGACCATAGCTATAAAGGCTTGTGAAGTTTCTGGTGTCTGTGATCATCAAGATTTACATGACCTTGAGTTGGCATTAGCAAGACACCTTTGGAAAGTTCAAGTCAATGGAATGCTAAATAGTTTACAAAATCCTTCTATCCAAGAGATACAGAAGCATCTGAAAGAGGGACTATCTCTGGAAATACCACCTGAAGATCATTACATGCTGCAACTTGCAAAAATGAATTGCTTGTATTTGCAGTGGGCCGAACTAGACAAGAAGGTTGCAGTTGATTCTAGGGCGCCCAGCCTAGATAAAGTTTTTGAACTCATTGAAGAAGGTGAAAACTTGCCTGTTAAGGTGGATGAGAATCTCAGGATTTTAAGGGCTCGAAGTATGCTTTATTGCATTTGTCGAAAACCGTTTGATCCAGGGAGGATGATTGCATGTAATCAGTGTGGTGAGTGGTATCACTTTGATTGCATGAAATTACCATACAGTCAAGAGTTCTACATTTGTCCTGCATGTAACCCCTCTACAGCAGGAATGCCAACATCTCTGGATAATGAGAGATTAATTAGCCGTAAACTGGAGGAACCTAAAACACCATCTCCAAGGCATACGTATCCAAGAAAGAAACAGAAGAGAGATGAGGCAATGTGTGGAAGCGATGATCAAATTCAAATTAATAATTTTAGGAATCTGAGTGGGATAGAATGTCTTAGATGGAAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTGACCTTCGGAGTCTTTCTTCATTTCTATGTATACACAACAACACTAACTGA | 5592 | 0.4033 | MSRKTTKTSVCFPGHPVLSYEFWVIPMGKGRPRAVEKGVAGQSLSVSSSGSLNIPSAPVYFPTEDEFTDPLEYIYKIRPEAEPYGICKIVPPKSWKPPFALDLDFFTFPTKTQEIHKLQARPAACDSKTFELEYSRFLEDHCGKKSRKKILFEGEELDLCILFNSVKRFGGYDKVVKEKKWGDVSRFVRPGRKMTDCAKHVLSQLYCEHLYDYENFYNQLNQGTGKKGMLEGEKSEHCVRSSGSKRMRSSDCLKVKDCKVQEEEHDQICEQCRSGLHGDVMLLCDRCDKGWHIYCLSPPLKQIPPGNWYCFNCLNSDRDSFGFVPGKQYNLEAFRRVADRSRRRWFGPGPVSRVQMEKKFWDIVEGSVGEVEVMYGSDLDTSVFGSGFPRSTVQKPESIDPKLWDEYSSNPWNLNNLPKLKGSMLQAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSINYLHWGEPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSIIQEPGNFVITFPRSYHGGFNLGLIALSGLNCAEAVNFAPADWLPYGAFGADLYQRYHKAAVLSHEELLCVVAQYSDIDSRASPYLKKELLRISDKDKSWREKLWKNGIVKTSRMAPRQCPQYVGTEEDPSCIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTVKLRLLYRHSLAELYDLVLSLDNYTSEEKAFGRSIRKNSSCPATLTKKVNGGSVSFSQLAAQWLLRSSEILQNPYSSDAFVSALREAEQFLWAGPEMNSVRDMVKNLIEAQKWAAGIRDCLRIIEAWLCGQESDIEKVHLEFVDELLTFNSPPSNEPAYHKLKEYTEGAIFLSQEINIALSKCSKISELESLHSRACASPIYVKDVKYLERKISSTKAWQHRARSCISVKHPAAVELDVLCKLKSEIMELQVQLPEIEVIQNILSQAESCSSKCSEILQGPMNLKNVDLLLKEWDSFMVDVPEVKLLRQYYKDGVSWVSNFNRVLGTTHERHDQHKVIDELKGILDDGLSLKIQVDELPLVETELQKALCREKAQKAHKSKMPLEFVEEVMKEARLLQIEGEKLFVGLSGVLAVAIPWEERAKEILSHKASFSDFEAMIRTSETIFMILPSLNDVKEALLEANSWLMNSKPFLVSSSCPSDSLRKVEDLQMLVSHSKLLKISFEEIRILETVLHNCKEWESEACSVLEDACHIFELDDIVHGISSGLMSRVEGLIARMQSTTRSALLLGFEFDEIPRLKATCSTLLWCKKILSFCNLSPSLEDVLEATEHLPHLCGSGALLNLLIGGVKWLRQALEGISGPRNSGRKSSEVEDIIRDYQTINIPFAAIIYQLEEAIGKHRLWQEQAHQFLSLCSGERSWLLMFKLKELGDNVAFGCTELDLILSEVEKVEDWKKHCMNFIGTLVQNENSLLAALQKMKQSLDRSLSIYGKLNDCKEECLCFYCFTNSEDQEFLTCSTCRNCYHILCLGPLVDNSHENYTCRSCKILEGESNYKKGTLLLGFGEKRAELKVLRELLSDAKNLCVRIDETDALNELVEQALLCRSCLREVVNFTSANVDSDLSIISERLTIAIKACEVSGVCDHQDLHDLELALARHLWKVQVNGMLNSLQNPSIQEIQKHLKEGLSLEIPPEDHYMLQLAKMNCLYLQWAELDKKVAVDSRAPSLDKVFELIEEGENLPVKVDENLRILRARSMLYCICRKPFDPGRMIACNQCGEWYHFDCMKLPYSQEFYICPACNPSTAGMPTSLDNERLISRKLEEPKTPSPRHTYPRKKQKRDEAMCGSDDQIQINNFRNLSGIECLRWKNRKPFRRAAKKRVDLRSLSSFLCIHNNTN | 1863 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele55g1039 | 1863 | Gene3D | Cupin | 39 | 151 | - | - | |
| Lele55g1039 | 1863 | FunFam | Transcription factor jumonji (JmjC) domain-containing protein | 43 | 147 | - | - | |
| Lele55g1039 | 1863 | ProSiteProfiles | Zinc finger PHD-type profile. | 1467 | 1516 | IPR019787 | - | |
| Lele55g1039 | 1863 | ProSiteProfiles | ARID domain profile. | 124 | 218 | IPR001606 | GO:0003677 | |
| Lele55g1039 | 1863 | Pfam | C5HC2 zinc finger | 655 | 706 | IPR004198 | - | |
| Lele55g1039 | 1863 | Gene3D | Cupin | 293 | 584 | - | - | |
| Lele55g1039 | 1863 | SUPERFAMILY | ARID-like | 107 | 223 | IPR036431 | GO:0003677 | |
| Lele55g1039 | 1863 | SUPERFAMILY | FYVE/PHD zinc finger | 1722 | 1770 | IPR011011 | - | |
| Lele55g1039 | 1863 | CDD | ARID | 126 | 214 | - | - | |
| Lele55g1039 | 1863 | SMART | PHD_3 | 1725 | 1767 | IPR001965 | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information
Transcription factors information