Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1036 ATGCTGGACATTGTAGCAAAGTTATTGTCTTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACATTAAAGAAAGACAAGGGCCAATTTCAAATTTTATGCTTGTCTGGCTCATACTTGGTTGCTGAAGATGGTGGGCCTCGTGATAGAACAGGAGGTTTGAGTGTTTCTCTTTCTAGTCCTGATGGTCAAGTTATCGGTGGTGGTGTTGCTGTGCTTATCGCTGCAAGCCCGGTTCAGGTGGTGGTGTGCAGTTTTGTACAGGGAAATGCTAAGATGAAGAAGCAAGTAACCTCTACCAAGAGTAAGAATTCTGAGGCTCAGGCTCAGGCTCGACATGATGGTAACAAGTCAAATAGCCCTATTACAATAGCCACGTTTCCTAATGTAGATCTGAGAAACGCACTCGTGCATACTCATGCCGGTATCGACTTGATTCGGGGCTGA 462 0.461 MLDIVAKLLSLSQQRPRALCIMSGTGTLKKDKGQFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPDGQVIGGGVAVLIAASPVQVVVCSFVQGNAKMKKQVTSTKSKNSEAQAQARHDGNKSNSPITIATFPNVDLRNALVHTHAGIDLIRG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1036 153 Gene3D - 2 113 - -
Lele55g1036 153 CDD DUF296 3 91 IPR005175 -
Lele55g1036 153 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 95 - -
Lele55g1036 153 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 92 IPR005175 -
Lele55g1036 153 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 116 IPR039605 GO:0003680
Lele55g1036 153 MobiDBLite consensus disorder prediction 102 127 - -
Lele55g1036 153 Coils Coil 95 115 - -
Lele55g1036 153 ProSiteProfiles PPC domain profile profile. 1 113 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1036 Lele-ChrLele55 9743360 9745012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1036 3 94 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 61.321 1.48e-35 124