Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1031 ATGAAAGTAATATGTCGTCTTAGGAGCATTGAACAGAGAAGAACCCGTCTGAGAAAAATCAAAAGCTCCTCCTCCTCCTCCACCACCACCATCCCCACCGTCAGTTCCACCACGCTCTTCCTTCTCCGTGAGATGTGTGAAGACAAATCGAGGGAGATGCAGGTATCATCATCAGCTGGATTCTGCTACTCCGATGTATCAGCGCCGGCGACAGCGATCCAAACCCATATGGGGAACAATCATCATCAGATCCAAGGGTTTGAATCCGACCCGGCGGCGGACATGTTCAACCTCACAACTAGTATGGACATGATTGGATTCTCCAAGAATCTTCACCACCAACAGCAGCAAACTAGTGAAACTAACAGCCTCGTTTGGAAAAGCTTTCTGGGTAAACCCACAACCCATCACCACAATCCGGGTCCTGATCCTTCTTATTCTTCTCCTTCCAAGACGACGACGACGACCATGAATAATAATAGTAATAATGAATCTGGTTCCACCAATTTCTATCAGTACACAAAACCAGATTTCACAGCCAACGATGACAATCTGATTGTAAGAGAAGCTCATAACCATCATCATCATCATCACCATGATTCTTCGTCAACCACTTGGCAAGATAACAGATTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAAGGCCAAGTCAGGGCCTCTCTCTCTCTCTGAGTTCAAATAATCCCTTAAGCATTGGGTTACAATCTTTTGAACTAAGACACACCAACAACCACCACCTTTTTCATCATCAGAACCAATCAGATTTTGTTTCTGGAGATAAGTTATTGTTGGGGAAATCAACAATGAATTTTCCTCATCCTCATCATCAACAACAAGAAGCTGCTGGGAATCTGTATCAAGGCCATTTTCTGCTTAAGAACTCAAAGTATTTGGTCTCTGCACAGGAACTTCTCAACGAGTTTTGCAGTCTGGGAACGAAGCAAAGTGACTTGGTGAAACAAAAGTCATCATCAAGTCAGAAAAACAAACAGTGGGAAGATGATAACGGAATCGGTCCCTCCAAGAAACATCCCGTCGGCTCTCTAGAATTCATCGAATTACAGAAGAGAAAGACCAAACTACTCTCCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAACCAAATGAAGGCGATGGTGTCCTCGTTCGAGGCGGTGGCCGGGGCTGGAGCGGCGAGGGTTTACTCGGCGTTGGCATTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATATTGAGTCAGATAGAAGTAGCAAGAAGAGGGATGGGAGAGAAAGATCCAGTTGCACCAGGAACCACAAAAGGTGAAACGCCGAGACTCAGAATCATAGATCAAGCTCTCAGACAACAGAGAGCTTTCCAGCAAATGAGCATGATGGAGTCTCATCCATGGCGTCCCCAAAGAGGCCTTCCAGAACGATCCGTTTCAGTTCTTCGCGCTTGGCTTTTCGAGCACTTCCTCCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAATCAAGGAGCATGAAAACAACATGGCTTCTTCTGAGGGGGTCCCCGATCCCGCCGTCGACTACAACATGCTTGCCGCCGGTGGTGGCCCGCCACCTACGAGGCGTCTGGTAGATCAGAAGCCTGTCCAGAACCACCGCCGGTTACTTCGAATAGACTCCGAGTGTGTGTCTTCTATCATAAACAACCAACCGGATCACAAAAACGAATCCGCTAGGAACAACAATCCCCATCAACAAGATCAATTTGGATCTGTGGAGCTTGATTTTTCATCTTACAACACTCACAACTCAGCTGGTGGTATGATTTCTTACAGTAATGAGAATGGCAATGATAGAAATCAGAACTATAACAGTGGAGGAGGAGGCGGCGGTGTTTCGTTGACGCTAGGGTTACAGCAACACGGCGGAAGTGGGGTGAGTCTGGCGTTTCCTCCACCGTCTCAGGCGTCACTGTTCTATCCAAGAGATCAAATGGAAGATTGTCAACCTGTTCAGTACTCGCTTTTGGACGGCGAAGCACAAAATCTTCCTTACAGAAATTTAATGGGTGCGCAGTTGCTCCATGACTTAGCAGGATAG 2238 0.4651 MKVICRLRSIEQRRTRLRKIKSSSSSSTTTIPTVSSTTLFLLREMCEDKSREMQVSSSAGFCYSDVSAPATAIQTHMGNNHHQIQGFESDPAADMFNLTTSMDMIGFSKNLHHQQQQTSETNSLVWKSFLGKPTTHHHNPGPDPSYSSPSKTTTTTMNNNSNNESGSTNFYQYTKPDFTANDDNLIVREAHNHHHHHHHDSSSTTWQDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRHTNNHHLFHHQNQSDFVSGDKLLLGKSTMNFPHPHHQQQEAAGNLYQGHFLLKNSKYLVSAQELLNEFCSLGTKQSDLVKQKSSSSQKNKQWEDDNGIGPSKKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYCNQMKAMVSSFEAVAGAGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTKGETPRLRIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEIKEHENNMASSEGVPDPAVDYNMLAAGGGPPPTRRLVDQKPVQNHRRLLRIDSECVSSIINNQPDHKNESARNNNPHQQDQFGSVELDFSSYNTHNSAGGMISYSNENGNDRNQNYNSGGGGGGVSLTLGLQQHGGSGVSLAFPPPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1031 745 FunFam BEL1-like homeodomain protein 4 487 549 - -
Lele55g1031 745 Pfam Homeobox KN domain 501 540 IPR008422 GO:0003677|GO:0006355
Lele55g1031 745 ProSiteProfiles 'Homeobox' domain profile. 481 544 IPR001356 GO:0003677
Lele55g1031 745 Coils Coil 365 385 - -
Lele55g1031 745 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 192 562 - -
Lele55g1031 745 SMART prehox3 300 433 IPR006563 -
Lele55g1031 745 MobiDBLite consensus disorder prediction 333 358 - -
Lele55g1031 745 Gene3D - 487 549 - -
Lele55g1031 745 Pfam Associated with HOX 306 431 IPR006563 -
Lele55g1031 745 MobiDBLite consensus disorder prediction 131 169 - -
Lele55g1031 745 SMART HOX_1 484 548 IPR001356 GO:0003677
Lele55g1031 745 MobiDBLite consensus disorder prediction 333 348 - -
Lele55g1031 745 MobiDBLite consensus disorder prediction 613 634 - -
Lele55g1031 745 MobiDBLite consensus disorder prediction 140 169 - -
Lele55g1031 745 CDD homeodomain 484 545 IPR001356 GO:0003677
Lele55g1031 745 SUPERFAMILY Homeodomain-like 485 550 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1031 Lele-ChrLele55 9027919 9033738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1031 209 744 Homeobox Transcription Factor Family AT5G41410 46.246 4.67e-137 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele55g1031 POX 1e-45 No_clan