Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1014 ATGAAGGAGAAAATGAACATACCCAATGTTGTCGTCATGTTGATCATGATTGCATCTCTTATGTTAGTGTCTGTAAGCTCAGCCTCACCCACGACTCACAATGTAGGAGGTGATTTTGGTTGGAATCTGCCATCCTACACAACATTCTATGATGATTGGGTCAAAAATACAACCTTTTCTGTTGGTGACATTCTTGCTTTCTATTATAAGCCGGGGTTGAACACGGTAGTGAAAGTTGACAAGGAGGACTATGAAAATTGCACTTCTAGGAATACCTTGGCCACATATTTTCAAGGGGATGCCATTATTCAGTTAGAGAAACCAGGCGACTATTACTTCTTTTGTAATGTTGGCAAGCATTGTGAGGCAGGCCAAAAGCTTCATGTCATTGTCCATTAA 399 0.406 MKEKMNIPNVVVMLIMIASLMLVSVSSASPTTHNVGGDFGWNLPSYTTFYDDWVKNTTFSVGDILAFYYKPGLNTVVKVDKEDYENCTSRNTLATYFQGDAIIQLEKPGDYYFFCNVGKHCEAGQKLHVIVH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1014 132 PANTHER BLUE COPPER PROTEIN 23 129 IPR039391 GO:0009055
Lele55g1014 132 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Lele55g1014 132 FunFam Cupredoxin superfamily protein 30 132 - -
Lele55g1014 132 ProSitePatterns Type-1 copper (blue) proteins signature. 109 125 IPR028871 -
Lele55g1014 132 Gene3D - 30 132 IPR008972 -
Lele55g1014 132 ProSiteProfiles Phytocyanin domain profile. 31 132 IPR003245 GO:0009055
Lele55g1014 132 SUPERFAMILY Cupredoxins 31 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1014 Lele-ChrLele55 8122840 8124161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1014 20 131 Phytocyanin Superfamily AT2G25060 35.965 8.91e-23 86.7