Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1005 ATGGAAAAAACCAAGCCTCGAGAATTCTACGATAACTATCGCAGGAAGATAATACGGCGAATCAATTCGAAGATATCTTCCATGGAAGAAGAAGAAGAAGAATACTGTAACAGAGCAGCTTCCACGTTGCACGGTTCTATATCGGTGATAGGGAGGCGGAGGATGATGGAGGACGCCGTGAAGATAATACCGGGATTCATGGGAAGCTACGACTTTTTCGCGGTTTACGACGGCCACGGTGGGGCCACGGTGGCGAATGCTTGCCGTGAAAGGATGCACTTGTTAGTGGCGGAGCAAGTAATAAAGGAGGCTGCTGGAGGAGATCATCAGAAGAGAGGATTGTTGGATTGGCGTGAAGCCATGTGCTCGTCCTTCATGAGGATGGACCGTGAAGTCGGAGACGGCGACGACACGGTGGGCTCCACCGCGGTGGTCATCGTCGTTAGCAGCAACCAGCTTGTTGTGGCCAACTGTGGAGACTCTCGAGCTGTACTCTTCCGTGGAGGTGTAGCCATCCCACTTTCAACAGATCATAAGGTGATCATCATCATCACCATATCCAACTAA 567 0.5079 MEKTKPREFYDNYRRKIIRRINSKISSMEEEEEEYCNRAASTLHGSISVIGRRRMMEDAVKIIPGFMGSYDFFAVYDGHGGATVANACRERMHLLVAEQVIKEAAGGDHQKRGLLDWREAMCSSFMRMDREVGDGDDTVGSTAVVIVVSSNQLVVANCGDSRAVLFRGGVAIPLSTDHKVIIIITISN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1005 188 SMART PP2C_4 33 184 IPR001932 -
Lele55g1005 188 SUPERFAMILY PP2C-like 40 181 IPR036457 -
Lele55g1005 188 ProSiteProfiles PPM-type phosphatase domain profile. 43 188 IPR001932 -
Lele55g1005 188 PANTHER PROTEIN PHOSPHATASE 31 180 - -
Lele55g1005 188 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Lele55g1005 188 Coils Coil 18 38 - -
Lele55g1005 188 CDD PP2Cc 44 180 IPR001932 -
Lele55g1005 188 Gene3D - 37 182 IPR036457 -
Lele55g1005 188 Pfam Protein phosphatase 2C 47 180 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1005 Lele-ChrLele55 7970537 7971103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1005 42 179 PP2C-type Phosphatase Gene Family AT4G26080 49.351 1.81e-40 140