Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0928 ATGTTCTCAAATTTGTTTTCCGTATTCATTGTTCGCCGGCTATCTACCAGCGCGAAGCTTCCAAGCATATCAAAAATAAACTCTAGGTACAAGAACTTGGCTATCAGACAAGCCCAGAATGCTCTTACTGAATATCTCCATGGCACAAGCTGCTTGCCCTATGTTTATGCCGAGCAAATTAGCAAGAACTCTCCTCTTTCGCTTGCTAGTCTCATAGCAAATGTAGATTTTTCAGCTGTCACTTTCTCAAAAAATCTCAAGAAATTCCTCAGATACCATCCCATCAATGAGTTTGAATTTTTCTTTGAAAGCATTGGCATAGACTATAATGACGTTTCTGGGTTGTTGCCTCCGAACAAGTTTTTCTTTTCCGAAGATCAAACTATTCTCGATGCGGCTGGTGCGCTTTCGGAATTTGGATTTCCGTGGAATGAGTTAGGTAAGTTGTATGTTGAGAATAGTTCCATATTTAGGAGTAGTGCGGGAGAACTGAAGTCTAAGCTATCAGAGTTTAAGAAATATGGTTTTCGTAATATTCATTTAGTTGGTATATGTTTGGCTTTCCCTTTTGTTTTGAGTGGGGAATGTGAAGTAGGTACTGAAAGTGAAGCATTGCTAAATTTTCTGAAGTTGGTATTTTTGGATTTTGAACTGGCATCTGTTGAGGAAAATGTGAATTCCTGGTACGAGGTATGTAAGAAAATTCGGGTATTTTATGATTTAAGTGGTGATAAGGAGAGGTTAGTGGAGCTCATTGGAGGAAATAAAAACATCTTTCTTGAACATGAGGAAGAGGCGTTGATTCAAAAGGTTGAGTATTTCTGTAGATTTGGTGTAAACAAGGAGGAGGTAGCTGTGTTACTTCTTCAGGGCCCAGAATTGTTGAGTCTTAATTTAGAGAAGCCAGTGATTAACGTAATGACGATATTGGAATATTTCGGCTTGGAGACTGAAAACCTGAAGGATGTCAGTCAAAAGTATGATCATGTATTGGGGACGAACAAAATCGCTAATCTGCCTCAGGTAATGAGGGCTTTGGACTTGCAAGAATGGTTCTTCAATAAAATCAGCGATGGAAATCATCAGTTGCTAATGAAATATATGGCAAGCTATCCTGATGAAGACCGAGCTGAAGAATATCAAAGTGGCTTGGAAATTATTCACGTTTCGAGGACCCCGCATCATACCATGAGTAAACTAAACTTGTTGCATAGCTGGGGCTTTGGGGAAAATGCTTTAATCTTTGATCTCTTAGCACACTTGCATGGCACTAGTATTGAATTAAAGGAAAGATTTGATTGCCTTCTGTGTTCAGGGATTGAATACTCCAAGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCCTAAACCAAAATGTTCAGTCTTTAGAGCAGAAGGTGAGTTTCCTGTGTCAGGGAATGGGATGCTCCTTAGAGTATCTACACACATACCCAGGTTATTTGCTTTTTGGTTTAGAGAACCGCATTAAGCCTAGGTATAGATTTCATAAGTGGCTTGCAGAAAAGGGTCTATGTACCTTAGACTATTCCATTGCAAGCTTAGTTGCAACTAGTGAAAAGGCTTTTCTAGCTCGTGTTTACAAAATGCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCCGATTCTAA 1653 0.3938 MFSNLFSVFIVRRLSTSAKLPSISKINSRYKNLAIRQAQNALTEYLHGTSCLPYVYAEQISKNSPLSLASLIANVDFSAVTFSKNLKKFLRYHPINEFEFFFESIGIDYNDVSGLLPPNKFFFSEDQTILDAAGALSEFGFPWNELGKLYVENSSIFRSSAGELKSKLSEFKKYGFRNIHLVGICLAFPFVLSGECEVGTESEALLNFLKLVFLDFELASVEENVNSWYEVCKKIRVFYDLSGDKERLVELIGGNKNIFLEHEEEALIQKVEYFCRFGVNKEEVAVLLLQGPELLSLNLEKPVINVMTILEYFGLETENLKDVSQKYDHVLGTNKIANLPQVMRALDLQEWFFNKISDGNHQLLMKYMASYPDEDRAEEYQSGLEIIHVSRTPHHTMSKLNLLHSWGFGENALIFDLLAHLHGTSIELKERFDCLLCSGIEYSKLCKMVRMTPKILNQNVQSLEQKVSFLCQGMGCSLEYLHTYPGYLLFGLENRIKPRYRFHKWLAEKGLCTLDYSIASLVATSEKAFLARVYKMHPAAPKHWFEQFRF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0928 550 Gene3D Transcription termination factor 3, mitochondrial 205 356 IPR038538 -
Lele55g0928 550 Gene3D Transcription termination factor 3, mitochondrial 381 549 IPR038538 -
Lele55g0928 550 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 SMART mt_12 478 512 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 Pfam mTERF 427 530 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 Pfam mTERF 233 335 IPR003690 GO:0003690|GO:0006355
Lele55g0928 550 PANTHER CGI-12 PROTEIN-RELATED 157 535 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0928 Lele-ChrLele55 6754566 6756218 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele55g0928 mTERF 7.1e-12 No_clan