Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0902 ATGGAAGATAGAAGTTTCTTATCGATCATCAGTTCAGTTCCTAGTTATGCTCACGGCCTTAAGGTTTTGCTGGTTCATAATGATACCTTGTCCATCATCAACTTGACATCTATGCTTCAGAAGTACTCATTCAGAGTTACTGTTACTGATGAAGCAAAAGCAGCTGTGTCAATGATTTGTAATGGTGAAGAAAGCCAATTCAACCTGGTAATGGCAAAAGATGACATGCCTGACATGGATACTCTTTCATTTCTGCACTTCATGCTTCAAAACTACATCCCTGTCATCTTCATCTCTTCTGCAGAATATAGTGATGTAAATTGGAAAGCATTGGCTAAAGGCTCATGTTTTTGCCTTGAAGAACCAATCCTTTTAGAGGATCTCAAATATGTGTGGCAGCATGTTTATGACACAAAAGTCAACTTGGCCAAGAAAAATGATCAACAAACTTGTTATGTAAGCAAGGAGCTGCATCAGAAGTTCTTGGATGCCATTAATGTTCTGAGTGAGAGGAATAATATTCGCCCAAAAGCAATACTTGAACAGATGAATGTGCCTAACCTCACAGCTCGCCAGATTTCAAGTCATCTTCAGGTTCTAATCTGTACCTTAATAATTGTCCTTAATATCAGTAATCTTTACTTTTTCTACCTTTGGATGCCAAGAACTAATTGCATTGTGGTTCTTCAAATATACAAATCATATAAGAATACTAACTCAAGAATCGATAAACCAGCAGGTTTGCATTTCTGGATTCACTTCCTCACCATTCAGATCCAAGGTTATCCAGGCTTGGCTATATCAATTGCAGCCCTTGGTGGTGGGAGCCAAAATCAAAACCAGTGTTCAATGATTTTCATTGAAACTCAAGAATCAGATATGCCACAAATGGATGAATTTCCAAGAGCATTGAACAATTATAGAAGCCAAAACCTAGAGGCTGAAGTGGGACAGCCAAAACCAGATGCTTCAATGGATCGAAACCAACCCATGAGAGAATATGATGATCCTATGAAAATGCTTGAGGAAGATTGTGAAGAACATGATTATTCTCAAAATGGACTACTTTCATATCAAATTGATCAATACTGTGAGATGCTAAGGAACAGTCTTTTGAGAAATAATAGACCTCATGATCCTCAAGATCTTGATATATGA 1158 0.3765 MEDRSFLSIISSVPSYAHGLKVLLVHNDTLSIINLTSMLQKYSFRVTVTDEAKAAVSMICNGEESQFNLVMAKDDMPDMDTLSFLHFMLQNYIPVIFISSAEYSDVNWKALAKGSCFCLEEPILLEDLKYVWQHVYDTKVNLAKKNDQQTCYVSKELHQKFLDAINVLSERNNIRPKAILEQMNVPNLTARQISSHLQVLICTLIIVLNISNLYFFYLWMPRTNCIVVLQIYKSYKNTNSRIDKPAGLHFWIHFLTIQIQGYPGLAISIAALGGGSQNQNQCSMIFIETQESDMPQMDEFPRALNNYRSQNLEAEVGQPKPDASMDRNQPMREYDDPMKMLEEDCEEHDYSQNGLLSYQIDQYCEMLRNSLLRNNRPHDPQDLDI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0902 385 SUPERFAMILY Homeodomain-like 154 199 IPR009057 -
Lele55g0902 385 Gene3D - 15 139 - -
Lele55g0902 385 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Lele55g0902 385 PANTHER - 8 144 - -
Lele55g0902 385 SUPERFAMILY CheY-like 18 143 IPR011006 -
Lele55g0902 385 Gene3D - 147 203 - -
Lele55g0902 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 200 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0902 Lele-ChrLele55 6417098 6422581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0902 156 198 Response Regulator Gene Family AT1G68210 60.465 5.94e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele55g0902 None None None