Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0897 ATGGAGGTTCCCTCCGCCGCTCCGACCCCCGTCTCCGCCCCATCCTCTCATCTCAACTATCCCGACTCCGTCGAATCCTCTCCTCGCTCCCGGAACACCGATTCCTGGGATGAGTCTATGCCTCCGGCCGCCGCCGCCGCCGCGGCTTCCGGCAAGCTTCGCTTCATGTGCAGCTACGGCGGCCACATCGTCCCTCGTCCCCATGATAAGTCCCTCTGTTACGTTGGCGGGGAAACCCGTATCGTTGTCGTTGAACGCCACACCTCCCTCGCTGACCTTTCCTCTCGTCTCTCTAATACCTTCCTCAACGGCCGTCCCTTCACTCTCAAATACTTGCTTCCCTCTGAAGACCTCGATTCTCTAATTTCTGTAACAACCAATGAAGACCTCGATAACATGATCGACGAATACGATCGAATTTCTAATTCGTCACTGAAACCCTCCAGAATCCGCCTCTTCTTGTTCCCGGCGAAACCCGATTCGGCCCAATCGATACCTGTAATTAGTAGCTCGGCGAAGTCAGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGGCGCTGGCAATCTGGATGGGGGTTTGAAAGATGTCGAGGCTGTGGGGTCTGGATCTTTTGGAAATGGCAAGAGTGGGAAGCAGCAGGGGCAAGATGTTCACTCTGTGCCAGATTCACCTATGCTGGAAACCACATCTTCATTTGGGTCCACTTCTTCATCGCCGTCGGTGGCTAATTTGCCGCCAATTCGGGTTCATGTTGATGATGGTAGTGGTGGTGGAGCGAGGGCACAGGATCAGAAGGCGGTGGGGATTGAGGATCAGCTTGCTCAAATGGGTATTGGTGGTGGACAGAAGCAGGATGAGGGTTTTCTGATGTCTTCACCTTCTACTTTGCCGGCATCCACCGTCCCTGCTACCGGTGTGCCTATTGGCTCCTCGGTCCTTCCCGGTGAATACCAGAATCGTGTTGTATCTGATGATGAGAGATCAGAGAGATCAGACCATGGAGTCCTTGGGGGTTATAGAAAGCCTCCAACAGCGCAGCAACAGACGGTGCCTCAGCCCCAGATTCTGCAATCGCAATTGCAGCAGAAGCAGACTGGAGGAGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGACAGTAGTATGACAAATGCAATGTCACGTTCAAAACCTATGGTCTATCAAGACCAAGCTCAGCTCCAAATTCCCTCAGGAGCTACAAGGGTTCCTAGTAATCCGGTTGATCCGAAACTTACAGTGTCTGATTCTCATGGACGGATCCAAATGCAGCAACAAGTATTGGAACAGGGATATGTTTTGCAACAACAATTCGAACAACAGCAGCAGCAGCAGCACCAATTTATACACGGAATGCAGCAACAAGTACAGGAGGTGGGATATGTGTTGCAACAACAATTCGAACAGCAGCAGCAACAACGACAACAACCTCCCCAACAGCAGCAGCAATTTATACATGGAGCACAGCAACAAGTACAGGAAGCGGGATATGTATTGCAACCTCAATTCGAACAGCAACAGCAACAATTCATACATGGCACACATTTCATTCACCATGCCCCTTCCCAGGCCATGCCACTCCCTCCATTTTATCCTGCATATCATTCCCAGCAGCAGCTTCATCCCCAGCATCATCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCTCTAGGCAGACCCAACATTACAACTTGTCTGCTCAGCAATCTAATATTAGTGAACCTGCTACAACAATTCCTTCTAGCCGCGCCCAAACAACACCAAATCCTGCAGCTTACAACCCCATCAGAAATGCTCCGGTACCTAAATCTGAAATGACAGCAGGTGCATATAGAACAGCAATCTCGGTCACCCCTCAAGTGGTTCAGGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTACCTATTCCCAGTATCAGCATCCATCTCAGGCTGTTGCTGCCAATTCTGCTACCCCGGCTAGTTATGCTTATGAGTATGATCCTGCTCATGCTCAGATATACTTCTCTCAGCCTCTGGCACCTTCAATGACTTCACAGTACCAAACTATGACAGGTGCTGCTGCTGCAGAGCCTCCTTCAGACAGCATGACGCAGCAAATAAGAACATCACAGCCACAGTAA 2202 0.5 MEVPSAAPTPVSAPSSHLNYPDSVESSPRSRNTDSWDESMPPAAAAAAASGKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERHTSLADLSSRLSNTFLNGRPFTLKYLLPSEDLDSLISVTTNEDLDNMIDEYDRISNSSLKPSRIRLFLFPAKPDSAQSIPVISSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDEVGAGNLDGGLKDVEAVGSGSFGNGKSGKQQGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHVDDGSGGGARAQDQKAVGIEDQLAQMGIGGGQKQDEGFLMSSPSTLPASTVPATGVPIGSSVLPGEYQNRVVSDDERSERSDHGVLGGYRKPPTAQQQTVPQPQILQSQLQQKQTGGVDLPSPDSVSSDSSMTNAMSRSKPMVYQDQAQLQIPSGATRVPSNPVDPKLTVSDSHGRIQMQQQVLEQGYVLQQQFEQQQQQQHQFIHGMQQQVQEVGYVLQQQFEQQQQQRQQPPQQQQQFIHGAQQQVQEAGYVLQPQFEQQQQQFIHGTHFIHHAPSQAMPLPPFYPAYHSQQQLHPQHHHQLEQQYQVYYVPSRQTQHYNLSAQQSNISEPATTIPSSRAQTTPNPAAYNPIRNAPVPKSEMTAGAYRTAISVTPQVVQVASGQPQQQFVTYSQYQHPSQAVAANSATPASYAYEYDPAHAQIYFSQPLAPSMTSQYQTMTGAAAAEPPSDSMTQQIRTSQPQ 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0897 733 SMART PB1_new 67 157 IPR000270 GO:0005515
Lele55g0897 733 MobiDBLite consensus disorder prediction 218 282 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 296 412 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 601 626 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 360 412 - -
Lele55g0897 733 SUPERFAMILY CAD & PB1 domains 68 164 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 601 619 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 338 354 - -
Lele55g0897 733 Pfam PB1 domain 68 156 IPR000270 GO:0005515
Lele55g0897 733 MobiDBLite consensus disorder prediction 223 261 - -
Lele55g0897 733 PANTHER OS05G0427100 PROTEIN-RELATED 19 505 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 9 37 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 305 324 - -
Lele55g0897 733 CDD PB1_UP2 56 155 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 1 41 - -
Lele55g0897 733 MobiDBLite consensus disorder prediction 710 733 - -
Lele55g0897 733 ProSiteProfiles PB1 domain profile. 52 157 IPR000270 GO:0005515
Lele55g0897 733 Gene3D - 72 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0897 Lele-ChrLele55 6372937 6375341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0897 12 199 MAP Kinase Kinase Kinase AT1G79570 33.511 1.60e-24 108