Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0895 ATGGATTCAAACACCTCAAGCTTTCTTCTGAATTCTTCAACTTTTCCCCCAAATCTCTACCAAGGAAAAGAAGATGATGATGATGGCATGATTGATTTGGGACTTAGCCTCAGAACTGTTCAACCTGAAGCTTATCATTCATCTGGCAACTTTTTGAGTTTGTGGAGATACGATGATGACCTTATGGATTGGCCACAATGTAATAATAATCTAAACAACCTCAAGAGCTCAAGCACAATGCATTCTAAATCTGTTCCAGAAAACTTTGATGAAGAAATTGAAGGTGTTCAGAGCAATGATAGGTGGGCTTATGTGAAGGTGAACATGAATGGTGTTACAGTAGGAAGAAAAATCTGTGTCCTTGATCATGAAGGCTACTCAAGTCTTGCAAACCAGTTAGAGAACATGTTTGGAAGCAAATCTGTTTCTGGTTTGAAACTGTTTCAATCTGAGTCAGAGTATTTACTTTTCTACAAAGACAGAGAAGATCATTGGAGAACTGTAGGTGATGTCCCATGGAAAGAGTTTGTAGAAACTGTGAAGAGGTTAAGGATTGCAAGAAAGAATGCAGCCTAA 576 0.3837 MDSNTSSFLLNSSTFPPNLYQGKEDDDDGMIDLGLSLRTVQPEAYHSSGNFLSLWRYDDDLMDWPQCNNNLNNLKSSSTMHSKSVPENFDEEIEGVQSNDRWAYVKVNMNGVTVGRKICVLDHEGYSSLANQLENMFGSKSVSGLKLFQSESEYLLFYKDREDHWRTVGDVPWKEFVETVKRLRIARKNAA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0895 191 ProSiteProfiles PB1 domain profile. 102 190 IPR000270 GO:0005515
Lele55g0895 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 59 190 IPR003311 GO:0005634|GO:0006355
Lele55g0895 191 Pfam AUX/IAA family 64 188 IPR033389 -
Lele55g0895 191 SUPERFAMILY CAD & PB1 domains 101 185 - -
Lele55g0895 191 Gene3D - 97 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0895 Lele-ChrLele55 6354588 6356055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0895 97 185 B3 DNA Binding Superfamily AT1G59750 37.079 1.09e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele55g0895 AUX_IAA 1.1e-22 CL0072