Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0894 ATGCTTCCTTTGGTCTCGTTGTTTCTTCTTCTTCTCTGTAATCATCTTTCCACTGTGACTTCTCTGAATGCCGAAGGCTCTGTTCTTTTGGCTCTTAAGCAATCCATCACAGACCCAGAAGGGTCTATGAGTAACTGGAATTCTTCTGATGCAAACCCTTGTTCGTGGAATGGGGTTACATGCAAGGAACATAGTGTTATTTCTATCAGTATTCCAAAGAGGAACCTTTACGGCTCACTTCCTTCTTCTCTGGGATCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTACATCCAGAGATATTCGTAGCACAAGGACTGCAAAGTTTAGTCCTTTATGGCAATTCCTTTTCTGGGCCTGTTCCACAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAGAATTTCTTCAATGAGTCTTTACCTGCTACAATTGTACAATGCAAGAGACTCAGAACCCTTGTTCTGCATCACAACAATTTCACCGGTCCTCTTCCGGATCGATTTGGTACTGATTTGTTCTCTCTGGAAAAACTTGACCTTTCTTTTAATCACTTCAATGGCTCAATTCCTAGTGATATGGGGAATCTATCTAGCTTACAAGGAACTGTAGACTTATCTCATAATAGTTTTTCTGGCTCAATCCCACCCAGCCTTGGTAACTTGCCCGAGAAAATTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCAATACCACAAAATGGTGCTTTGATGAACAGAGGGCCAACAGCTTTTATAGGCAATTCTGGTCTCTGTGGACCTCCTTTGAAGAACCCTTGTTCTTCAGAAACTCCTGGTTCTAGCCCGCCTTCCTCATTACCATTTCTGCCAGATAACTATCCACCTGGGGATTCTGGTAATCCTTATGGGAGAAATGAGAAAACCAAAGGGTTAAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAATTTGCCTCTTGGGTCTGTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAATCTGGATAATGATGATGAAGCTGGTTTTGAGAAGGGAGAGAAAGGGAGGAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCCGAGACCTTATCAGAGAATGTTGAGCAATATGATCTCGTCGCGTTAGATTCTCAAGTGGCATTTGATTTGGATGAGCTTCTTAAGGCTTCCGCTTTTGTTTTAGGAAAGAGTGGAATAGGCATTGTCTACAAGGTCGTGCTTGAAGATGGGCTTACCTTAGCTGTGAGAAGACTAGGCGAAGGCGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTGGAAGCAATAGGAAGATTAAGGCATCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGATTATATACCCAATGGAAATCTTGCTACAGCAATTCATGGGAAGGCTGGAATAGTCGCATTCACGCCACTTTCTTGGTCAGTTAGGCTCAAAGTCATGAAAGGAATTGCGAGAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAAAAATATGTTCATGGAGATCTGAAACCAAGTAACATACTGCTTGGGAACAACATGGAACCGCACATTTCTGATTTTGGACTTGGAAGACTTGCGAATATTGCTGGAGGATCTCCAACCTTGCAATCCAATCGAGTTGCTGCTGAGAAGCCCCATGAAAGGCAAAAGAGCTTTTCTGCATCAGAAGTCTCGGCTAATGTTTTGGGAACTGGTTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCGCAGAAATGGGACGTTTATTCATATGGCGTGATTTTGATAGAGATGATCACAGGAAGGTTGCCCATTGTCCACGTGGGAAGCTCAGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGATAAGAAGCCACTCTCAGATGTAATAGACCCATATCTTCCAGAAGACGCAGATAAGGAAGAGGAGATTATCGCAGTTTTGAAGATCGCAATGGCTTGTGTCCACAGCAGCCCCGAGAAGAGACCAACAATGAGGCATGTTCTCGATGCTTTGGATAGGTTGTCCGCTTCTTCTGATTGA 2139 0.4282 MLPLVSLFLLLLCNHLSTVTSLNAEGSVLLALKQSITDPEGSMSNWNSSDANPCSWNGVTCKEHSVISISIPKRNLYGSLPSSLGSLSQLRHVNFRNNKLFGKLHPEIFVAQGLQSLVLYGNSFSGPVPQEIGKLRYLQTLDLSQNFFNESLPATIVQCKRLRTLVLHHNNFTGPLPDRFGTDLFSLEKLDLSFNHFNGSIPSDMGNLSSLQGTVDLSHNSFSGSIPPSLGNLPEKIYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKNPCSSETPGSSPPSSLPFLPDNYPPGDSGNPYGRNEKTKGLSKGAIVGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNDDEAGFEKGEKGRRKECFCFRKDESETLSENVEQYDLVALDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFTPLSWSVRLKVMKGIARGLVYLHEFSPKKYVHGDLKPSNILLGNNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGSSEMDLVQWIQFCIEDKKPLSDVIDPYLPEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0894 712 Gene3D Ribonuclease Inhibitor 77 282 IPR032675 -
Lele55g0894 712 FunFam Leucine-rich repeat protein kinase family protein 483 710 - -
Lele55g0894 712 Gene3D Phosphorylase Kinase; domain 1 375 482 - -
Lele55g0894 712 FunFam Leucine-rich repeat receptor-like protein kinase 22 178 - -
Lele55g0894 712 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Lele55g0894 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Lele55g0894 712 Gene3D Ribonuclease Inhibitor 18 76 IPR032675 -
Lele55g0894 712 SUPERFAMILY L domain-like 24 276 - -
Lele55g0894 712 CDD STKc_IRAK 413 707 - -
Lele55g0894 712 SMART serkin_6 412 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0894 712 Gene3D Transferase(Phosphotransferase) domain 1 483 712 - -
Lele55g0894 712 Pfam Protein kinase domain 413 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0894 712 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Lele55g0894 712 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0894 712 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Lele55g0894 712 PANTHER OS05G0588300 PROTEIN 131 707 - -
Lele55g0894 712 MobiDBLite consensus disorder prediction 276 312 - -
Lele55g0894 712 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Lele55g0894 712 SMART LRR_typ_2 184 208 IPR003591 -
Lele55g0894 712 SMART LRR_typ_2 87 111 IPR003591 -
Lele55g0894 712 SMART LRR_typ_2 135 159 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0894 Lele-ChrLele55 6349091 6351396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0894 1 712 Receptor kinase-like Gene Family AT2G01210 67.822 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele55g0894 Pkinase 7.9e-35 CL0016