Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0888 ATGATCCAAAACCACCTCTTCTCATCTTTCTTCTTCCTCTTCCTTTATTCGCTCACCAGATTCACCTTCTGTTCATCAGTGAACCCAAAGTTCGAAGCTTGTAACCCTGCAACCTGCGGTAACCATACCATAAAATACCCTTTTTACATCCTCGGCCATCAAGAATCATTCTGTGGATACCCAGGTTTCAGCCTTTCTTGTTCCGATAATGGCGTCCCAATCCTTAATATCTCCCATACGCAGTACATCGTCCATGAAATTTCTTACACCAATCCGTCAATTCGAGTGTCCGAAGCTTCTATCACTTCATCAAACGCCACATCATCATCGTCCTGTGCGATTCCTCGTATTCACAATATCACCTTCGACGGAACAACATTCAGTTTCGCTCGGAATCAGAAAGATCTTTTCTTGTTGTTTGGATGCAACCTGGGGTCGCTGCCGGAGAATCTTCGGAAGTACAAAATTGGGTGTTCTGCAGAAAACGCGACGATTCCAGTTTTGGGAATGACGGAGGAGGGCGGAGATTTGAGGTCGGCGTCGGAGAAGTGTAATGGTAGCGTGGTGGTGAAAACGAAGATTGAAAATGAAACGAAAGGAGGGATTAATGGAGATGTGTTGAGAAGAGGGGTTGAGTTGAATTGGACTGTGGCAAATTGCAGTTTGTGTGAGAAGACCAGAGGCAAGTGTGGGTTCGACTCCGACGAAAGCGTTTTCAGTTTCAGATGCTATTGCCTAGATAGAGATCATGCTCTCAGATGCGATACCGGTTAG 774 0.4561 MIQNHLFSSFFFLFLYSLTRFTFCSSVNPKFEACNPATCGNHTIKYPFYILGHQESFCGYPGFSLSCSDNGVPILNISHTQYIVHEISYTNPSIRVSEASITSSNATSSSSCAIPRIHNITFDGTTFSFARNQKDLFLLFGCNLGSLPENLRKYKIGCSAENATIPVLGMTEEGGDLRSASEKCNGSVVVKTKIENETKGGINGDVLRRGVELNWTVANCSLCEKTRGKCGFDSDESVFSFRCYCLDRDHALRCDTG 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0888 257 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Lele55g0888 257 Pfam Wall-associated receptor kinase C-terminal 176 247 IPR032872 -
Lele55g0888 257 PANTHER OS01G0690200 PROTEIN 8 251 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele55g0888 Lele-ChrLele55 6298549 6299322 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0888 32 244 C3H Transcription Factor Family AT2G46495 23.009 3.30e-10 57.8