Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0887 ATGATCCAAAACCACCTCTTCTCATCTTTCTTCTTCCTCTTCCTTTATTCGCTCACCAGATTCACCTTCTGTTCATCAGTGAACCCAAAGTTCGAAGCTTGTAACCCTGCAACCTGCGGTAACCATACCATAAAATACCCTTTTTACATCCTCGGCCAACAAAAATCATTCTGTGGATACCCAGGTTTCAGCCTTTCTTGTTCCGATAATGGCGTCCCAATCCTTAATATCTCCCATACGCAGTACATCGTCCATGAAATTTCTTACATCAATCCGTCAATTCGAGTGTCCGAAGCTTCTATCACTTCATCAAACGCCACATCATCATCGTCCTGTGCGATTCCTCGTTTTCACAATATCACCTTCGACGGAACAAGATTCAGTTTCGCTCGGAATAAGAAAGATCTTTTCTTGTTGTTTGGATGCAACCTGGGGTCGCTGCCGGAGAATCTTCGGAAGTACAGAATTGGGTGTTCTGCAGAAAACGAGACGATTCCAGTTTTAGGAATGACGGAGGAGGGCGGAGATTTGAGGTCGGCGTCGGAGAAGTGTAATGGTAGCGTGGTGGTGAAGACGAAGATTGAAAATGAAACGAAAGGAGGGATTAATGGAGATGTGTTGAGAAGAGGGGTTGAGTTGAATTGGATTGTGGCAAGTTGCAGTTTGTGTGAGAAGACCACAAGGCAAGTGTGGGTTCGACTCCGATGA 708 0.452 MIQNHLFSSFFFLFLYSLTRFTFCSSVNPKFEACNPATCGNHTIKYPFYILGQQKSFCGYPGFSLSCSDNGVPILNISHTQYIVHEISYINPSIRVSEASITSSNATSSSSCAIPRFHNITFDGTRFSFARNKKDLFLLFGCNLGSLPENLRKYRIGCSAENETIPVLGMTEEGGDLRSASEKCNGSVVVKTKIENETKGGINGDVLRRGVELNWIVASCSLCEKTTRQVWVRLR 235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0887 235 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Lele55g0887 235 PANTHER OS01G0690200 PROTEIN 8 225 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele55g0887 Lele-ChrLele55 6267770 6268477 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0887 32 225 C3H Transcription Factor Family AT2G46495 23.671 3.59e-09 54.3