LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele55g0884	ATGGCTCCCGATTCTGTGCTTCCTTTGCTTTGTCTGTGTTGTTTTCTGCTTCGTGTCTCAGTTGCGTGCCCAGAGCATTTTCCCTGTGGAGATCTTGGTGATATTCAATTCCCCTTCTTCGACAACACAACGAACCCATCATGTGGTTTACTACCCATAGCAGGTTGTGATGATGATCCAATGAAACCCAAAACTGTCAAATTGGGAAAAGAATCAGAATGGTTACAGGTTGAGAAAATAATCTACCAGAAGGTCGGCGAACAACAAATCATCTTTCGTGACCCGAAGTTTGGAGAGAAATTGAGATCCAATCCTTGCAGTGTCTTTCTTGAGGAGTATCCTACGCTTTTTCTTGAGGAGTATCCTACGCTTTCTTCCTCTCTCTTAAACGGGATTTCCCATTTGAAATGCAAACACCCTCTCGACCACGCCCCACCCGAGTATCACTGTAATGCCTACTACATTTACGATCTTCCCCACGATGTTGAGTGGGCCGACCCTTCTTTAGAATGTTCTCTTATACAGCTTCTTTCCGAACAGCTTATCTATATACAAGTACATGTACCTCAGTCTTGTATTCACTGTCATTCCAGAAAAGGGATATGCCTACCTGATGGAAAATGCATCGTCCCTGAGAACAAGAAAATGGATCCCAAGTCTATCACAATAGGTCTAGCTATTGGAAGTGTTGGCGTGATTATAATTGGTTTCATTGTTATTCTATTGCGGAACAAACGATACAAGTCCTTAGGCTCACAAAATCAGTTAAGAAGCATTGAATCTGATAATACTCACTCCAGAAGCAATCAATCTGATAATACACACTCAAATGCAATCCTAGAAAGTAGAAATATATACTTTGGGGTCCCTCTCTTCTCCTATGAGGAACTCCAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTGGGAAGTGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGACGAGAAGTTGCTGTGAAGCGCCTATTTGAGCGCAACTACAAACGTGTACAGCAATTCATAAATGAAGTTAAGATCCTCACACGCTTGCGCCACAGAAACCTAGTGTCACTCTATGGCTGCACTTCTCGTGCCAGCCGTGAACTGCTGCTGGTCTATGAATACATTTCGAACGGAACTCTTGGTTGCCATCTCCATGGAAATCTAGCAAAACCTGGTTCACTGCCATGGCCCGTGAGGATGAGGATTGCCGTAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGTGACATCATTCACCGCGACGTCAAATCCAGCAACCTTCTTCTTGACGACCATTTTTGCGTCAAGGTTGCTGACTTCGGTCTTTCAAGGTTGTTCCCCAAGTTTGTCTCTCATGTCTCCACAGCTCCAGCAGGAAGCCCGGGTTATTTGGACCCAGAATATCACCAATGCTACCAGCTTACTGAAAGGAGTGATGTTTATAGCTTCGGGGTCGTGCTCATTGAGCTGATATCTTCTAAGCCAGCTATTGATGTTACAAGGCACAAGGATGAGATTAAATTGGCAAATCTGGCAGTTAACAAGATTCAAAGAGGAGCGTTCACTGAGCTGGTAGATCCTTCCCTTGGTTTTGAGTCAGATGACGAGGTTAAGAAGATGATAATCTCAGTGGCAAAGTTAGCTTTTCAGTGCCTACAGAGGGATAGGGAGCTAAGACCTTCGATGGATGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATCATGATCTTAAGCATCTAGAGTTTCGCATTGCCGGCTTTTCAAACAAGGAGATTCATAGCTCTCTCCCTATCTCAGTACATAAGGATGGAGCTGGATCATTGAACAACTCGAAGCCACAACGCCCTCCCCATACAATATGA	1890	0.4365	MAPDSVLPLLCLCCFLLRVSVACPEHFPCGDLGDIQFPFFDNTTNPSCGLLPIAGCDDDPMKPKTVKLGKESEWLQVEKIIYQKVGEQQIIFRDPKFGEKLRSNPCSVFLEEYPTLFLEEYPTLSSSLLNGISHLKCKHPLDHAPPEYHCNAYYIYDLPHDVEWADPSLECSLIQLLSEQLIYIQVHVPQSCIHCHSRKGICLPDGKCIVPENKKMDPKSITIGLAIGSVGVIIIGFIVILLRNKRYKSLGSQNQLRSIESDNTHSRSNQSDNTHSNAILESRNIYFGVPLFSYEELQEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNYKRVQQFINEVKILTRLRHRNLVSLYGCTSRASRELLLVYEYISNGTLGCHLHGNLAKPGSLPWPVRMRIAVETANALSYLHACDIIHRDVKSSNLLLDDHFCVKVADFGLSRLFPKFVSHVSTAPAGSPGYLDPEYHQCYQLTERSDVYSFGVVLIELISSKPAIDVTRHKDEIKLANLAVNKIQRGAFTELVDPSLGFESDDEVKKMIISVAKLAFQCLQRDRELRPSMDEVMEFLQKIENGNHDLKHLEFRIAGFSNKEIHSSLPISVHKDGAGSLNNSKPQRPPHTI	629

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele55g0884	629	CDD	STKc_IRAK	310	579	-	-
	Lele55g0884	629	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	424	436	IPR008271	GO:0004672\|GO:0006468
	Lele55g0884	629	ProSitePatterns	Protein kinases ATP-binding region signature.	310	332	IPR017441	GO:0005524
	Lele55g0884	629	Gene3D	Phosphorylase Kinase; domain 1	277	380	-	-
	Lele55g0884	629	Gene3D	Transferase(Phosphotransferase) domain 1	381	590	-	-
	Lele55g0884	629	ProSiteProfiles	Protein kinase domain profile.	304	591	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele55g0884	629	FunFam	Wall-associated receptor kinase-like 20	381	588	-	-
	Lele55g0884	629	Pfam	Protein kinase domain	305	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele55g0884	629	FunFam	WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK)	276	380	-	-
	Lele55g0884	629	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	20	614	IPR044652	GO:0004672
	Lele55g0884	629	SMART	serkin_6	304	576	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele55g0884	629	SUPERFAMILY	Protein kinase-like (PK-like)	285	583	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele55g0884	Lele-ChrLele55	6206945	6209279	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele55g0884	27	592	Receptor kinase-like Gene Family	AT1G25390	44.027	3.70e-153	454

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Lele55g0884		Pkinase	1e-46	CL0016