Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0880 ATGGTTTCAGTTCAAGCGTTTTGCTTTCTCTTAGTTTCATTCCTTGTGGTGCTGCTTTTCTGGGTTGGAGACGCAAAGTGCCGACCTTCATTTAACTGTGGAAATCTGGGGAACAAAATTCAGTTCCCTTTCACCAGCTCAGATCATCGCTCAGATTGTGGCTTATTGGTCATTCATGGCTGTGATGAAGAAGAACCAAATGCCCCAAAATCCATTAAGTACTCTGAAACATGGTACGATGTTCTTGAACTCGACCACGACCAGTTCACCATGACCATCAGAGACGATTATCTCCATGACCTTTTGCAGTTAAATAGCTGCAAGGTCTTCACCTATGCTCTCTCTCTCCCTTTTAGTACAAACAGTGATTTTCTTTCTTATCATTTAGAAAATAATTTCACCATGTTCGTCTGCGACAACCCCCTCAATCTGAAGCCTCCCATAGAATCATACTATAACTATCATGTTGACAACTGTTCTGAAGAAATCTTCTATAGAACTTCACTTTCTTATCGTGAGGGTTCTGATGATTCTGTGATCTCCAGACTTTTGAACTCGTCATCATGTAAACCTGTTCAGCTTCCAATCGCGAAGAACACCGAGGTTGTGGTGGATAATCCTTTTGTTTTCCTGTCTGATAATATCACCATCAGTATACGGCTATCCCCTCAGTGTTATAGCTGTCACTACGATAATGGAGGACAATGTCGACTTGACTCCAAGGGCAGGTTTTTTTGTGCTAAAGAGAAAACAAGAAAGGTCACACTTATAGTGGCAACAGCAGTTTCAGCCACTGGAGCAGTGGCAATACTTTTGGTATTGGGATTCTACTTGAGAAGACGCTTTTACAGCAAGCAAAACCCTACCCACATAATAATTGAGCAATTTCTTGAAGAACATGGACACCTTGCAGCCAAAAGGTATAGTTACTTGGAGGTGAAGAAAGCCACAAACTCATTCAACAACAAGTTGGGTCAAGGAGGATTTGGCAGTGTGTACAAAGGCAGGTTAAGTGATGGAACTCTTGTTGCAGTGAAGGTTCTTACTGAATTGAACGGTGATGGTGAAGAATTCATCAATGAAGTTTCCAGCATTAGTGTGACTTCTCATGTCAACATTGTTAGCTTATTGGGTTTTTGCTTGGACGGTTCAAAAAGAGCTTTGATATATGAGTACATGTCAAATGGATCTATTGACAAGTGCATACAAACACAGAAAGATCCATCAAAGATCAATCTGCAGTTAACCTGCAAAGCTATACACAATATCGCGATTGGTGTTGCTCGTGGATTAGAGTACCTACACAGAGGTTGCAACACTAGAATTTTGCATTTGGATATAAAGCCTCACAACATATTGCTTGACGATGACTTCTGTCCTAAAATATCAGACTTTGGATTGGCGAAAATCTGCCCGAAAAAAGATAGCATAGTGTCATTGTTGGGCGCGAGAGGAACTGCGGGATACATAGCGCCTGAAGTGTTTTCTAGGAATTTTGGTGGGGTTTCCCACAAGTCTGATGTATATAGTTATGGGATGATGATGTTAGAAATAGTTGGAGGAAGAAGGAAGAATATGAACATGGAAGTTGAAGGTTCAAGTGAAATATTCGTGCCACATTGGATTCACCAGCGTCTAAGATCAAACCAAGAGCTCAAATTGGAGTGCATAAAGAATGAAAAGGATAGAGAAGTAATCAAGAAGATAGTGATAGTGAGCTTATGGTGCATACAGATTGAGCCTTCAAATCGGCCGGCGATGAAGAAGGTGGTGGACATGATGGAAGGAGATTTGGAGTCCTTGGAATTACCACCTTTGCCTATTCTTTCTTTGCTTCCTACATCTTCCTCTGGGATTTTTTCAGAGGGTCTTATCTCCAGCAGCTTCCATTCTATCTCACTTAGTTCCTAA 1911 0.4118 MVSVQAFCFLLVSFLVVLLFWVGDAKCRPSFNCGNLGNKIQFPFTSSDHRSDCGLLVIHGCDEEEPNAPKSIKYSETWYDVLELDHDQFTMTIRDDYLHDLLQLNSCKVFTYALSLPFSTNSDFLSYHLENNFTMFVCDNPLNLKPPIESYYNYHVDNCSEEIFYRTSLSYREGSDDSVISRLLNSSSCKPVQLPIAKNTEVVVDNPFVFLSDNITISIRLSPQCYSCHYDNGGQCRLDSKGRFFCAKEKTRKVTLIVATAVSATGAVAILLVLGFYLRRRFYSKQNPTHIIIEQFLEEHGHLAAKRYSYLEVKKATNSFNNKLGQGGFGSVYKGRLSDGTLVAVKVLTELNGDGEEFINEVSSISVTSHVNIVSLLGFCLDGSKRALIYEYMSNGSIDKCIQTQKDPSKINLQLTCKAIHNIAIGVARGLEYLHRGCNTRILHLDIKPHNILLDDDFCPKISDFGLAKICPKKDSIVSLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMMLEIVGGRRKNMNMEVEGSSEIFVPHWIHQRLRSNQELKLECIKNEKDREVIKKIVIVSLWCIQIEPSNRPAMKKVVDMMEGDLESLELPPLPILSLLPTSSSGIFSEGLISSSFHSISLSS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0880 636 Gene3D Transferase(Phosphotransferase) domain 1 393 601 - -
Lele55g0880 636 SUPERFAMILY Protein kinase-like (PK-like) 304 594 IPR011009 -
Lele55g0880 636 PANTHER RUST RESISTANCE KINASE LR10-RELATED 292 607 IPR045874 GO:0004672
Lele55g0880 636 Gene3D Phosphorylase Kinase; domain 1 294 392 - -
Lele55g0880 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lele55g0880 636 FunFam PR5-like receptor kinase 393 605 - -
Lele55g0880 636 ProSiteProfiles Protein kinase domain profile. 318 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0880 636 Pfam Protein kinase domain 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0880 636 FunFam serine/threonine-protein kinase PBS1-like 292 392 - -
Lele55g0880 636 SMART serkin_6 318 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g0880 636 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0880 Lele-ChrLele55 6160704 6163455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0880 27 624 Receptor kinase-like Gene Family AT1G66910 38.959 2.75e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele55g0880 Pkinase 1.5e-44 CL0016