Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0875 ATGGAGGATCCTATTGATCATTACCAAACCAAAAGAACGAACCCCACTAATTCCACCACGAGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATGGAAGACGAAGCAGTGGTGATTGAAGATGTATCAGATTCCACAGGCAAGCCTGCCACTCCATCTGGATCGCCGGATTACAGCGGAGGAGGACGTGGAGGTGGGGGTGGGGGTGGCGGTGCGGCGTTTCTTCCCTCTTCCGGTGACAGAAAATACGAGTGTCAGTATTGTTGCAGAGAGTTTGCGAATTCACAAGCGCTTGGTGGGCACCAGAACGCGCACAAGAAGGAGCGTCAACAACTAAAGCGAGCGCAGTTGCAAGCCACGCGCAACGCCGCCGTTTCGTTTGTTCGGAACCCCATAATCTCTGCCTTCGCTCCTCCGCCGCACCTCCTGGCCCCGAACGGGTCCGTCGTGCTACCGGCAGCTCCGGCGTCGTGGTTTTACATGCCACCACGTTCCGCGCCGTCTCCGTTCCATGTGTCTGTGTCTCACGGTTGTGTGTTTCCATCTTCGGCGCCGAATAACGCTGTGAATTATAGCGGTATTACAGGTGGGAGATCTGCGGCGGGTGCAGGGATGGTTCCATATGATGGCGTTGCAGGGGATTCATCATCCACATTGTCGTCCCTCGGGTCTCCACATGGACTCTCTCGGGTCAACGGCCGGGTCGACGGGCCTTCCTTGAGTCGGTTCTCCAAGGTGAAATCAGGGTCCAATTTCGATGATTCACTGGGTTTAGACTTACATCTCAGCCTTGCACCGGCTGCGCCGTGA 813 0.5523 MEDPIDHYQTKRTNPTNSTTRLKLFGFNVQEDMEDEAVVIEDVSDSTGKPATPSGSPDYSGGGRGGGGGGGGAAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPNGSVVLPAAPASWFYMPPRSAPSPFHVSVSHGCVFPSSAPNNAVNYSGITGGRSAAGAGMVPYDGVAGDSSSTLSSLGSPHGLSRVNGRVDGPSLSRFSKVKSGSNFDDSLGLDLHLSLAPAAP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0875 270 Gene3D Classic Zinc Finger 76 131 - -
Lele55g0875 270 FunFam Zinc finger protein GIS3 66 134 - -
Lele55g0875 270 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Lele55g0875 270 MobiDBLite consensus disorder prediction 42 74 - -
Lele55g0875 270 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Lele55g0875 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Lele55g0875 270 PANTHER ZINC FINGER PROTEIN 5 11 269 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0875 Lele-ChrLele55 6113561 6114373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0875 17 268 C2H2 Transcription Factor Family AT1G68360 45.283 2.97e-53 171