Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0867 ATGAGGCTTCTTTCTTCCTTCTCCATAGCTCACTTCCACCATCATTGCTCTGTTCCTGTTAGGTTTCAGGAGTCTTCTTCTTCTTCGCTTACCCTTTTCCCTGCAACCACTTCTGCTTCTTGTTGTTGTTATTCTTCTCGCGAGCCTCGCGGGCCGCGAATGGATGCTGACTCTGCCTATCACCGCCATCGCCGGAAAGACAAGGTGGTTCTCATAATGGGTGCCACCGGCTGTGGGAAGTCACGCCTGTCCATCGACCTCGCGACCCGTTGCGCCTGCTCGGAAATCATCAACGCAGATAAAATGCAACTTTACAGAGGACTTGACATCGCCACCAACAAGATTCCTTTGGGTGAACGGAACGGCGTCCTGCACCATCTCCTCGGAGACGTCGACCCTGCAAGCGGAGAGTTCTCGCCGTTGGATTTTCGTTCAGTCGCTGGGTCCATTATCTCGGATATCACCTCGAGGAGGAAGCTTCCCATCGTCGCCGGTGGGTCGAACTCGTTGATTCATGCTCTTGTTGTGGACCAGTTTGACCCGGCGTTAAATGTGTTCGATGAAGGATCGTCACCGAGTTTGATCTCGTCCGAGTTAAGGTACAACTGTTGCTTCCTCTGGGTGGACGTATCGTGCACTGTGTTATCAGATTACTTGTTGAAACGAGTCGACGACATGCTCGACATGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCGGAAGCGAGCGACCTAGAAGATGAATCAGAACACCGGGTCGGGTTAAGGAAGGCGATAGGAGTACCCGAATTTGACCGGTATTTTAAGCGATATCCACCATCGGGTGGGCTGAGAAGAGAAGAGGATCGGCTGCGGAAGGCCGCATACGAGCAAGCAGTGAGGGCGATAAAGGAGAACACTTGTCGGCTAGCGAAAAGGCAAATAGGGAAGATCCTGCGGCTTAAAGAAGCAGGGTGGGACCTACGGAGGCTGGACGCCACAGAGTCGTTCCGAGCGGCGATGACGCCGGCGAGATGCTCCGAGGACGGCGGCGAGAGATGGCCGGATATTTGGGAGAGACAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1113 0.5373 MRLLSSFSIAHFHHHCSVPVRFQESSSSSLTLFPATTSASCCCYSSREPRGPRMDADSAYHRHRRKDKVVLIMGATGCGKSRLSIDLATRCACSEIINADKMQLYRGLDIATNKIPLGERNGVLHHLLGDVDPASGEFSPLDFRSVAGSIISDITSRRKLPIVAGGSNSLIHALVVDQFDPALNVFDEGSSPSLISSELRYNCCFLWVDVSCTVLSDYLLKRVDDMLDMGMVDELAQFFDPEASDLEDESEHRVGLRKAIGVPEFDRYFKRYPPSGGLRREEDRLRKAAYEQAVRAIKENTCRLAKRQIGKILRLKEAGWDLRRLDATESFRAAMTPARCSEDGGERWPDIWERQVAEPSVKIVKRFLKE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0867 370 Gene3D - 66 368 IPR027417 -
Lele55g0867 370 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 66 368 IPR039657 -
Lele55g0867 370 Pfam IPP transferase 103 177 - -
Lele55g0867 370 Pfam IPP transferase 198 309 - -
Lele55g0867 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 247 IPR027417 -
Lele55g0867 370 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 212 322 - -
Lele55g0867 370 FunFam Adenylate isopentenyltransferase 212 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0867 Lele-ChrLele55 6025811 6026923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0867 200 369 C2H2 Transcription Factor Family AT2G27760 29.016 1.86e-12 66.2