Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0858 ATGAGACTGAGTTGCAACGGTTGCCGGATTCTCCGAAAAGGTTGCACCGATAACTGCATCATTCGTCCTTGCCTCCAATGGATCCACTCTCCCGAATCTCAGGCCAACGCCACCCTCTTCCTTGCCAAGTTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCGACGCGGCCCCGCCACACCTCCGCCCAGCTGTGTTCAAGTCGTTGCTGTACGAGTCTTGTGGGAGGATTGTGAATCCGGTTTACGGCTCCGTGGGTTTGTTGTGGACGGGGGAGTGGGATCGCTGCCAGGCCGCCGTCGATGCGGTCATGATGGGGTCGGACATCAACGCCGGCTCCGGTGCCGTGGCGGTTTCCGATTCGCAAGGGGGGGATCAAGGTTTTGTCGCTGCTTGCGATATACGCCACGTGGCGGAGAAGGAGAAGGAGAAAGGCGAGGTGAGCAAGGTGAAGGGGAGAGGGCAGTTCAAGAGGAATGGGAAAGTGATAAAGCCGAAGGCGCGAGTGGGTTGGATCGACTCGTCGGCGCTGTGGAAGCCGGTTCAGGAAATGTCGGAGAGTGACAGCGTGTTCTCCGGGCAAACCGTGGAGGCCAGCTTGGTGAACCGGGAGAGTAGAGATGGTGGTGGAGATAATGAAGATGCGAACCGAGCCGGAAAAGCTCCGGTTAATTTGAATTTGAGTCTTGGAAAAGCCTGA 699 0.5808 MRLSCNGCRILRKGCTDNCIIRPCLQWIHSPESQANATLFLAKFYGRAGLLNLLDAAPPHLRPAVFKSLLYESCGRIVNPVYGSVGLLWTGEWDRCQAAVDAVMMGSDINAGSGAVAVSDSQGGDQGFVAACDIRHVAEKEKEKGEVSKVKGRGQFKRNGKVIKPKARVGWIDSSALWKPVQEMSESDSVFSGQTVEASLVNRESRDGGGDNEDANRAGKAPVNLNLSLGKA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0858 232 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
Lele55g0858 232 MobiDBLite consensus disorder prediction 187 232 - -
Lele55g0858 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 200 - -
Lele55g0858 232 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lele55g0858 232 MobiDBLite consensus disorder prediction 187 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0858 Lele-ChrLele55 5953602 5954368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0858 1 162 AS2 family AT1G67100 60.494 2.97e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele55g0858 LOB 3e-24 No_clan