Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0841 ATGCAAAGCTTCAAGACCCCTCAACAACTCTATTGCCACCCCTCCTTCTTTCTTCGGGGAGATGACGCCGGCAGAAATCCTACGCGTTTCTCTGATCTTGGAGAGCTTCAACATTCCGTTTCTCCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTGAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTGAGCTCGAACATCGGGTCTTCAGAAATTGCTTCACCAGGGGCAGGGTGCCTTGATACAGGGCAGCATATCATGTATCAGAAGGGAATCACGGCTGCCGGAGCCTCCATGACGGTGGGGAACGGGCATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAGTAGCCAACACACTGATACTTCCACAGATATCGACCCCGATGATAAAAACCAATGTAACAGAGTTCAAGCTGGGAGAGCCGTGGTTGCTGATTCCATGGATCAACCTAAGTGCAAACCTGAGGATCCCAAGACTCTTCGTAGGCTGGCTCAGAATCGAGAGGCAGCAAGAAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTGTGAGACTAGCACAACTAGAGCAAGAGATTCAACGCGCACGACAGCAGGGAATGCTTGTTGCAAGTGGATTTCCTGGTGATCATGCTCATTCCATGGTCGGAAACGGTGCCTTGGCATTCGACATGGACTATGCACGATGGGTCGATGAGCATCAACAACTGATAAATGACCTAAAAACGGCTGTTAATTCTCAAATGGGAGATAACGAACTGCCTATCATTGTCGAGGGCGTTACTGCGCATTACAACGAGTTATTCAGGTTAAAGAGCATAGGGGCGAAGGCTGATGTATTTCACATGCTCTATGGTATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTGAGGAACCAGCTTGAGCCATTAACAGAACAGCAATTAGTGGAATTGTATAATTTGCAGCAGTCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGAGACACTTTCCTCAACCTCCCTCGGGCCCGCCGGTTCCGGTAATGTCGCCGAATACATGAGTCAAATGGCGCTTGCTCTGAGCAAGCTCGCCACGTTGGAGAGTTTCCTACATCACGCTGATCTCTTGAGGCAACAGACCCTGGAACAACTTCAAAAGATCTTGACCACGCGACAAATAGCACGTGCGTTCCTCGTGATAAATGACTACCTTTCGCGACTACGAGCACTTAGTTCATTATGGTTAGCTCGCCCTAGAGAGTAG 1380 0.479 MQSFKTPQQLYCHPSFFLRGDDAGRNPTRFSDLGELQHSVSPFQHDDAVDLSSSSMFTVKSSNVAVVPINLQYGTLSSNIGSSEIASPGAGCLDTGQHIMYQKGITAAGASMTVGNGHMENWGDSGMVDSSQHTDTSTDIDPDDKNQCNRVQAGRAVVADSMDQPKCKPEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQEIQRARQQGMLVASGFPGDHAHSMVGNGALAFDMDYARWVDEHQQLINDLKTAVNSQMGDNELPIIVEGVTAHYNELFRLKSIGAKADVFHMLYGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLTEQQLVELYNLQQSSLQAEDALSQGMEALHQSLSETLSSTSLGPAGSGNVAEYMSQMALALSKLATLESFLHHADLLRQQTLEQLQKILTTRQIARAFLVINDYLSRLRALSSLWLARPRE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0841 459 FunFam BZIP family transcription factor 172 221 - -
Lele55g0841 459 ProSiteProfiles DOG1 domain profile. 240 456 IPR025422 GO:0006351|GO:0043565
Lele55g0841 459 CDD bZIP_HBP1b-like 173 225 - -
Lele55g0841 459 Pfam bZIP transcription factor 173 212 IPR004827 GO:0003700|GO:0006355
Lele55g0841 459 PANTHER TRANSCRIPTION FACTOR TGA9 116 459 - -
Lele55g0841 459 Coils Coil 192 219 - -
Lele55g0841 459 Gene3D - 172 223 - -
Lele55g0841 459 SUPERFAMILY Leucine zipper domain 173 214 IPR046347 GO:0003700|GO:0006355
Lele55g0841 459 SMART brlzneu 169 222 IPR004827 GO:0003700|GO:0006355
Lele55g0841 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Lele55g0841 459 MobiDBLite consensus disorder prediction 124 144 - -
Lele55g0841 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Lele55g0841 459 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0841 Lele-ChrLele55 5807989 5810858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0841 3 459 bZIP Transcription Factor Family AT1G68640 57.962 2.96e-165 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele55g0841 DOG1 5.1e-28 No_clan