Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0817 ATGGAGTTCACTTGCAAAGACTTCAATGTGGGAAAATGTGAGGGAGAGAAAATAGTAGACGGAGAAACAATGCCTTTGGTTCTTCAACCTCCAGAACCAAACAAGAGTGACATGGAATCGTTACTCTCAGCTCTTAGAAACAACAAGGAGTGGTTCGAGCAGATGATCATCAAGAACAGTGCGGTTCTTCTTCGAGGTTTCGATGTCAATAACGCTGTCGACTTCAATGACATCGTCGAAACCTGCGGCTGGGAAGACATTCGCTACGTTGGACCTGCCCCTCGTACTCATATTTACAAGAGAGTTTGGACTGCCAATGAAGGACCCCTCTCCGAATTCATATACTATCACCATGAAATGGTTCTGATAAAGGAGTGTCCCAAGAAAGTGATACTGTTCTGCGAGATACCACCCCCAGAAGGAGGAGAGACACCATTTGTTCCAAGCTTCAAAGTGACAGAGAAGATGTTGAAGGAGTTCCCAGAAGAGGTTAAGGAAATGGAAGAGAAAGGGATGAAGTACTATTTCATAGCACGTAGTACTCAGAACGACAATTCCTCCATGAGAGGCCGAGGATGGGAAGATGCCTTTGGGACCTCAGATCGCGAGGAAGCGGAGAGAAGGGCGAAAGCTCTGGGGATGGAGATGGAGTGGCTACCAGATGGAGGAGTGAAGACGATACTAGGGCCGAGGCCATTGACGAGGGTGTTCGAAGGAAGGAAAGGAAGGAGGATGTGGTTTAACACGGTGGTAGGGATGTACGGGAAGGAGCTAAGCTCGGCGACAATGGCGGATGGGACTGAGATTCCGAGGCATGTGGTGGAGAGGTGTGGAGAGATCATTGAAGAAGAAAGCATACAGTTCAAGTGGCAGAAAGGGGATGTTGTCTTCCTCGATAACATGGCTTTGCTTCATGGCAGAAGACCTTCGCTTCCTCCCAGAAGAGTTCTGGTTGCTACTTGCAAGTACTTTTTAAGTGGCCAGAATGGGGAAGTGGGAAAGGGAGAACTGATGGGATATGGAATTGATGCAAAACGGGTATCTAAGCTGATAGAGTCAGTTGAATCATCAGTAGGTTCGGAATTGGATCTGACGGCCAAGATTTACCCTTTGACTAGTTCTGTAGTTATGAGGGTAGCATTTAGAGACAAGCGTAAAGATGGTGAAGAGCTCGTTCGATTGCTCCATGAAATAGTGAAACAATTGGGTGGGTTTCATTTTGCTGATTTGTTTCCTTCAATAGAACTTATTCATCTCATGACTGGAATGGAAGCAAGGCTGTGGAATATTCATAAGAAATTTGATAAGGTTTTAGAGAATATTCTCCAGGAGAATCTAAAGAACCATATGAAAGCTGCAGAAGGAGGACATGAGAGTGATTTGGCAGCAGCAGAAGAAAATCTTGTTCAAATTCTTTCAAGGATCCAGCGAAGTGAAAGCTTTGATATGAAGAAAATATGTACTCTTGAGCTCTTAAGTGCGAGGAAGGTTCAATCATTCTCCTATATACGACAAGATGAGGTATCTAAGCTCATAAATTCAATTCAATCATCAAGAGGTTGGGTTATGGATCTCACAAGCAAGATTTACACTTTGACAAGTTCTATAGTTTGGAGGGTAGCATTTGGGAACAAATGTAAAGATGGTGAAGAAGAGCTTATGCAGTTGCTTCATTCAGAATTAGAACAATTAGCAATGTTTCAATCTGCTGACTTTTTTCCTTCAATGAAACTTATTCATCTCGTGACTGGAATGAACGCAAAGCTAGTGAAGATTCACAAGAAATTTGACTAG 1794 0.4365 MEFTCKDFNVGKCEGEKIVDGETMPLVLQPPEPNKSDMESLLSALRNNKEWFEQMIIKNSAVLLRGFDVNNAVDFNDIVETCGWEDIRYVGPAPRTHIYKRVWTANEGPLSEFIYYHHEMVLIKECPKKVILFCEIPPPEGGETPFVPSFKVTEKMLKEFPEEVKEMEEKGMKYYFIARSTQNDNSSMRGRGWEDAFGTSDREEAERRAKALGMEMEWLPDGGVKTILGPRPLTRVFEGRKGRRMWFNTVVGMYGKELSSATMADGTEIPRHVVERCGEIIEEESIQFKWQKGDVVFLDNMALLHGRRPSLPPRRVLVATCKYFLSGQNGEVGKGELMGYGIDAKRVSKLIESVESSVGSELDLTAKIYPLTSSVVMRVAFRDKRKDGEELVRLLHEIVKQLGGFHFADLFPSIELIHLMTGMEARLWNIHKKFDKVLENILQENLKNHMKAAEGGHESDLAAAEENLVQILSRIQRSESFDMKKICTLELLSARKVQSFSYIRQDEVSKLINSIQSSRGWVMDLTSKIYTLTSSIVWRVAFGNKCKDGEEELMQLLHSELEQLAMFQSADFFPSMKLIHLVTGMNAKLVKIHKKFD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0817 597 Gene3D - 5 322 IPR042098 -
Lele55g0817 597 PANTHER GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED 14 322 - -
Lele55g0817 597 FunFam Clavaminate synthase-like protein At3g21360 5 322 - -
Lele55g0817 597 SUPERFAMILY Clavaminate synthase-like 10 321 - -
Lele55g0817 597 Pfam Taurine catabolism dioxygenase TauD, TfdA family 37 318 IPR003819 GO:0016491
Lele55g0817 597 SUPERFAMILY Cytochrome P450 482 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele55g0817 597 Gene3D Cytochrome P450 481 597 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele55g0817 597 Gene3D Cytochrome P450 340 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele55g0817 597 SUPERFAMILY Cytochrome P450 346 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0817 Lele-ChrLele55 5565111 5576633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0817 483 597 Monolignol Biosynthesis Gene Families AT4G36220 31.304 1.14e-14 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0669 53 16862135 16864147 Lele55g0817 55 5565111 5576633 hybridization