Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0806 ATGCCCCCTGAGCAAGAAACCACTACGGTACATGTGACGACGCCAAGCATTCCAACCATCCCCAACCGCCCCCCGCCGGAGAACAGATCCGTTCACGCCGACCCTGGAGGGTCCGCCGACAAGCCCACAAGTTTGGACAATTATAAGCTCCACCCATCAACAACACGTTCCGTTCTTCACCAATCCTTGCGACCTGTTACCCTCAAATTTGAAGACGTTTCTTACAGTATAACCTTTGGGAGCAAAAAGAATGGGGGTTGTTTTTCTTCAGAAAACCCGAAACAGACCCGGACGATTCTCAACGGCGTGACTGGGATAGTCCGGCCGGGTGAATTGATGGCAATGCTGGGCCCATCAGGCAGCGGCAAGACCACGCTACTCACTGCACTAGCTGGTCGGCTCGCCGGAAAAGTCTCCGGAAACATAACTTACAATGGCCTTCCTTTTTCTAGTTCCATGAAAAGAAAGACCGGTTTTGTCACACAAGATGATGTGTTATACCCTCACCTCACTGTTCTTGAGACACTCGTTTTTACAGCTTTGTTAAGATTACCGAAAAGTCTCACCAGAGAAGAGAAAGTAGAACAAGCCGAGATGGTTATCATGGAGCTCGGGTTAACCAGGTGCCGGAACACCGCCGTGGGTGGCGCTGCAGCTTTGTTCAGAGGAATTTCGGGTGGGGAGCGAAAGCGGGTCAGTATTGGGCAGGAGATGCTGGTGAACCCGAGTTTGTTGTTGCTGGATGAACCCACCTCCGGGCTGGACTCAACGGCTGCTCAACGCATAGTGGCGGTGCTCCGGGCTTTGGCACGGCGTGGACGGACGGTGGTGACTACTATTCATCAGCCGTCAAGCAGGTTGTACAGGATGTTCGATAAGGTTACTGTACTATCAGACGGGTGCCCGATTTATGCGGGGAAATCGGGTCGGGTTATGGAATATCTTGAGTCCGTCGGGTATCTGCCCACTTCCAACTTCATGAACCCGGCGGATTTTCTGCTTGACCTTGCTAATGGCATTGTGGATGATGTTAAGGTGGATGATCAGAATGAGATGCATGGCAGATTAGAGCACATTGAAGATCAAGCTTCAGTAAAACAGTCTCTGGTTTTATCCTATAAAAAGATTTTGTATCCTTCCCTGAAACAAGAGCTTCAGCTAAATAACGGAGACATAGCTAGTCCAATACCCAGAAGCTCAGAGAAGCAGTGGAACAGCAGCTGGTGGGAGCAATTCAATGTCTTGCTTAAGAGGGGTTTACAAGAGAGGAGACATGAATCTTATTCAGGCTTAAAGATTTTCCAAGTGTTATGTGTTTCAATTCTCTCAGGACTTCTCTGGTGGCGTTCTGATCCCTCACACATACAAGATCAGGTAGGCCTGCTGTTCTTCTTCTCAATCTTCTGGGGATTCTTCCCACTATTCAATGCCATCTTTGCATTCCCTTTGGAGAGGCCAATGCTGATAAAAGAAAAATCTTCAGGAATGTACCATCTTTCATCCTACTACATGGCAAGAATGGTAGGTGACCTACCAATGGAACTTGTCCTTCCCACAATCTTCGTAACCATAAGCTATTGGATGGGTGGCCTAAAGCATTCACTAATCACCTTCATGTTAACCCTCTTAATCATCATCTTAAATGTATTAGTCTCTCAAGGAATAGGCCTTGCACTTGGAGCCATATTAATGGAAGTTAAGCAAGCCACAACCCTAGCTTCAGTGACCATGCTGGTTTTTCTTCTAGCTGGTGGATACTACATTCAGCAGATTCCATCTTTCATAGCTTGGTTGAAGTACATATCTTTCAGTCACTATTGCTACAAGCTTCTGGTTGGGGTTCAGTATGAAGAAAATGAGGTTTATGACTGTGGATTAGGTTTAGGGTTACATTGTAGGGTAATGGATTTTCCTGCTATAAAGTGTTTGGGAGGCCTTTCTTATTTGTGGGCTGATGTGGCTGCATTGTGTGTGATGCTGATTGGATACAGAGTTGTGGCTTATTTGGCTTTGAGGATAAGGTAG 2025 0.4701 MPPEQETTTVHVTTPSIPTIPNRPPPENRSVHADPGGSADKPTSLDNYKLHPSTTRSVLHQSLRPVTLKFEDVSYSITFGSKKNGGCFSSENPKQTRTILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKVSGNITYNGLPFSSSMKRKTGFVTQDDVLYPHLTVLETLVFTALLRLPKSLTREEKVEQAEMVIMELGLTRCRNTAVGGAAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAVLRALARRGRTVVTTIHQPSSRLYRMFDKVTVLSDGCPIYAGKSGRVMEYLESVGYLPTSNFMNPADFLLDLANGIVDDVKVDDQNEMHGRLEHIEDQASVKQSLVLSYKKILYPSLKQELQLNNGDIASPIPRSSEKQWNSSWWEQFNVLLKRGLQERRHESYSGLKIFQVLCVSILSGLLWWRSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKEKSSGMYHLSSYYMARMVGDLPMELVLPTIFVTISYWMGGLKHSLITFMLTLLIIILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQQIPSFIAWLKYISFSHYCYKLLVGVQYEENEVYDCGLGLGLHCRVMDFPAIKCLGGLSYLWADVAALCVMLIGYRVVAYLALRIR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0806 674 FunFam ABC transporter G family member 22 87 318 - -
Lele55g0806 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 318 IPR027417 -
Lele55g0806 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 324 IPR003439 GO:0005524
Lele55g0806 674 MobiDBLite consensus disorder prediction 1 47 - -
Lele55g0806 674 Pfam ABC transporter 100 252 IPR003439 GO:0005524
Lele55g0806 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 668 - -
Lele55g0806 674 Pfam ABC-2 type transporter 281 345 IPR043926 GO:0140359
Lele55g0806 674 SMART AAA_5 109 301 IPR003593 -
Lele55g0806 674 MobiDBLite consensus disorder prediction 1 17 - -
Lele55g0806 674 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Lele55g0806 674 Gene3D - 69 319 IPR027417 -
Lele55g0806 674 CDD ABCG_EPDR 65 306 - -
Lele55g0806 674 Pfam ABC-2 type transporter 410 616 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0806 Lele-ChrLele55 5476839 5481254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0806 99 300 Calmodulin-binding Proteins AT2G36910 32.547 9.77e-13 70.1