Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0802 ATGAGGGAAGAAAGGAGAAGAAGAAGAAAGCTGCGTCTCAGCAAGATCTATTCATTCACCTGTGGTAAATCTTCATTCAAAGAAGATTATTCAAATATCGGTGGAAGAGGCTATTCCAGAGTTGTCTTCTGCAATGAACCGAACGGCCCTGATGCTGTAATTCAGAATTATCCTGATAATTCTACCAGTTCTACAAAATACACTCTTGCTACTTTCTTGCCTAAGTCACTGTTTGAACAGTTTAGGAGAGTGGCTAATTTTTATTTTTTAGTCACTGGTGTTTTATCTTTCACCGAACTTGCACCTTATTCAGCTGTTAGTGCTATCATTCCTCTGATAATCGTTATTGGTGCAACCATGGTGAAAGAAGGTATCGAAGATTGGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGAAAAGTTAAAGTGCATAGAGGTGATGGTGTTTTCGAACATACCGAGTGGAAGAATCTGATGGTAGGGGATATAGTGAAGGTAGAGAAAGATGAATTCTTTCCAGCAGACCTTCTATTGCTTTCATCCAGCTATGATGATGCTGTTTGTTATGTTGAGACCATGAACTTGGATGGAGAGACAAATTTGAAGTTGAAACAAGGATTGGAGGTAACTTCTTACTTACATGAGGATTTTGACTTCAAGGATTTTAAAGGGACTGTAAAATGTGAAGATCCAAATGCAAATTTGTACTCTTTTATTGGTAGCTTGGATTTTCAGGAGCATCAATATCCTCTTTCTCCTCAGCAACTTCTTTTGAGAGACTCTAAACTCCGTAATACGTCCTTTATATTTGGAGCTGTCATTTTCACTGGTCATGACACCAAAGTAATACAAAACTCTACTGCTCCCCCTTCGAAGAGAAGCAGAATTGAGAAGAAGATGGACAAAGTGATATATTTCATGTTCTGTATTCTGTTGCTATTGTCATCTGTTGGATCCATTGTCTTTGGCATAACAACGAAAGATGACTTGAAGAATGGATTGATGAAAAGGTGGTATCTAAGACCAGATGATTCTACAATTTTCTTCGATCCAAAAAGATCAGCAGTAGCTGCAATATACCATTCCTTGACAGCCTTAATGTTGTATAGCTACTTTATTCCAATCTCCTTGTATGTGTCGATAGAAATTGTGAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTATTTTGAAGAAGCAGACAAACCTGCTCATGCCCGTACTTCAAACTTGAATGAAGAACTCGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATTAAATGTTCAGTTGCTGGGGTGGCTTATGGACGTGGTGTTACAGAGGTTGAGAGGTCTATGGGTAGAAAAAAAGGCTCGCCATTGATCCATGAACAGGTTAATGATATAGAATTAGATGAAATCAGGTATTCTACTGATGCCAAAGCACCCATCAAAGGTTTTAATTTTTCAGATGAAAGGATAATGAATGGAAAATGGGTTAATGAGCCAAATGCTGATGTTATCCAAAGGTTTTTCCGCTTATTGGCAATCTGTCATACAGCCATACCTGAAGTGGATGAAGAAACGAGAAAAGTCTCGTATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTTATTGCAGCTAGAGAACTTGGCTTTGAGTTTTACAAAAGGACTCAGACTAGTTTGTCAATTCATGAGTTGGACCTAGTTTCTGGCAAGAAAGTTGAAAGGGTCTACCAACTTCTCAATGTTTTAGAGTTTAGTAGTACAAGGAAGCGAATGTCAGTGATAGTGAAAACTAAAGAGGGAAAAATTTTGCTACTCAGTAAAGGTGCCGACAGTGTCATGTTTGAAAGGCTTTCCAAGAATGGGAGAGAGTTTGAAGAGAAAACCATGAAGCATGTGCATGAATATGCCGATGCAGGCCTTAGGACCCTTATACTAGCCTATCGTGAACTGGATGAAGAAGAATATAAGGAGTTTGATAAGAAATTTTCTGAAGCCAAAAACTCAGTCAGTGCAGATCGGGAAACACTAATTGGTGAAGCATCTGATATAGTTGAGAGCAATCTAATCCTCCTTGGTGCCACTGCAGTAGAGGATAAACTCCAGAATGGGGTTCCTGATTGCATTGACAAGCTTGCTCAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTAGGCAAGGAATGAAGCAGATTATCATTCATCTGGAGACTCCAGAAATTCAAGCATTGGAGAAGGAGGGGGATAAAATTTCCATTGCCAAGGCATCGAGAGAAAGTGTCCGCCGTCAGATATCTGAAGGCACAGCTCAGCTTGCTGCATCCAGTGGAACCTCTCAGCAAGCATTTGCTCTGATTATTGATGGAAAATCTCTTGTTTATGCTCTAGAGGATGGAATGAAGAACATGTTTCTGCAGCTTGCACTTGGATGCGCATCTGTTATCTGCTGTCGCTCCTCACCCAAGCAGAAGGCACTGGTCACTAGGCTGGTTAAATCTGGAACTGGAAAAACTACATTAGCTATTGGCGATGGAGCCAATGATGTGGGGATGCTTCAAGAGGCAGATATAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATGTTGCAATTGCACAGTTCAGATATTTGGAACGGTTACTACTCGTGCATGGACATTGGTGTTATAGAAGGATATCATTGATGATATGTTACTTTTTCTACAAGAACATCACGTTTGGCTTCACTCTATTTTTGTATGAGGTGTATTCTTCATTCTCTGCACAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTCTCTTCACTTCCCGTGATGGCCCTCGGCGTATTCGACCAAGATGTCTCTGCCCGGTACTGTCTTAAGTTTCCTTTGCTGTATCAAGAAGGAGTACAGAATGTGCTTTTCAGTTGGCGCCGTATATTCAGTTGGATGCTAAACGGATTCGTCAGTGCCATAATAATCTTCTTCTTCAGTGTGAAAGCGATGGAGCTTCAGGCCTTCGACAAGGAAGGAAGAACTGCCGGGAGAGACATTCTAGGAGCAACAATGTATACTTGTGTTGTCTGGGTTGTGAACTTACAGATGGCACTTGCCATAAACTACTTCACCTTGATACAACATATCTTTATCTGGGGTTCCATTGCTTTGTGGTATATTTTCCTTATGATATATGGAGCAATGAGTCCTTCATTATCCACAAATGCTTACAAAGTCTTCCTTGAAACTCTCGCTCCCTCGGCTTCCTTCTGGCTTGTGACAATCTTCGTCGCGATCTCAACTCTCACTCCATATTTCTCATACTCAGCTATTCAGATGAGGTTCTTCCCATTGTATCATGAAATGGTCCAGTGGGTGAGGCATGAAGGGAAGACCAATGATCCTGAGTATTGTGACATGGTGAGGCAGAGATCATTGAGGCCGACAACTGTCGGTTCGACAGCTCGAGTAGCCGCTAGAAACAGAACTGTTAGCCATAGATGA 3591 0.4088 MREERRRRRKLRLSKIYSFTCGKSSFKEDYSNIGGRGYSRVVFCNEPNGPDAVIQNYPDNSTSSTKYTLATFLPKSLFEQFRRVANFYFLVTGVLSFTELAPYSAVSAIIPLIIVIGATMVKEGIEDWRRKKQDIEVNNRKVKVHRGDGVFEHTEWKNLMVGDIVKVEKDEFFPADLLLLSSSYDDAVCYVETMNLDGETNLKLKQGLEVTSYLHEDFDFKDFKGTVKCEDPNANLYSFIGSLDFQEHQYPLSPQQLLLRDSKLRNTSFIFGAVIFTGHDTKVIQNSTAPPSKRSRIEKKMDKVIYFMFCILLLLSSVGSIVFGITTKDDLKNGLMKRWYLRPDDSTIFFDPKRSAVAAIYHSLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYFEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGVTEVERSMGRKKGSPLIHEQVNDIELDEIRYSTDAKAPIKGFNFSDERIMNGKWVNEPNADVIQRFFRLLAICHTAIPEVDEETRKVSYEAESPDEAAFVIAARELGFEFYKRTQTSLSIHELDLVSGKKVERVYQLLNVLEFSSTRKRMSVIVKTKEGKILLLSKGADSVMFERLSKNGREFEEKTMKHVHEYADAGLRTLILAYRELDEEEYKEFDKKFSEAKNSVSADRETLIGEASDIVESNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKEGDKISIAKASRESVRRQISEGTAQLAASSGTSQQAFALIIDGKSLVYALEDGMKNMFLQLALGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRYLERLLLVHGHWCYRRISLMICYFFYKNITFGFTLFLYEVYSSFSAQPAYNDWFLSLYNVFFSSLPVMALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRIFSWMLNGFVSAIIIFFFSVKAMELQAFDKEGRTAGRDILGATMYTCVVWVVNLQMALAINYFTLIQHIFIWGSIALWYIFLMIYGAMSPSLSTNAYKVFLETLAPSASFWLVTIFVAISTLTPYFSYSAIQMRFFPLYHEMVQWVRHEGKTNDPEYCDMVRQRSLRPTTVGSTARVAARNRTVSHR 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0802 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 704 IPR023299 GO:0000166
Lele55g0802 1196 FunFam Phospholipid-transporting ATPase 545 703 - -
Lele55g0802 1196 Gene3D - 570 677 IPR023299 GO:0000166
Lele55g0802 1196 SFLD Haloacid Dehalogenase 408 919 - -
Lele55g0802 1196 SUPERFAMILY HAD-like 421 923 IPR036412 -
Lele55g0802 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1146 IPR023298 -
Lele55g0802 1196 FunFam Phospholipid-transporting ATPase 703 908 - -
Lele55g0802 1196 Pfam Cation transport ATPase (P-type) 535 630 - -
Lele55g0802 1196 SUPERFAMILY Calcium ATPase, transduction domain A 139 285 IPR008250 -
Lele55g0802 1196 FunFam Phospholipid-transporting ATPase 118 288 - -
Lele55g0802 1196 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Lele55g0802 1196 CDD P-type_ATPase_APLT_Dnf-like 59 1028 - -
Lele55g0802 1196 SFLD p-type atpase 408 919 IPR044492 -
Lele55g0802 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 839 952 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele55g0802 1196 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lele55g0802 1196 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Lele55g0802 1196 Gene3D - 699 908 IPR023214 -
Lele55g0802 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 1157 - -
Lele55g0802 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele55g0802 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1146 IPR032630 -
Lele55g0802 1196 Gene3D - 118 288 - -
Lele55g0802 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0802 Lele-ChrLele55 5427637 5433827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0802 11 1193 Primary Pumps ATPases AT1G68710 75.207 0.0 1937