Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0797 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGCTCCCTGGTCTATTGAAAGATCAAGTTTGCTTGGTTAAAAGGAAAGACTCTGATCGCTATAAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTTTTTGTAGTAATCCGTGCATGCCAGTTGTTGTCCCAAAATAATGATGGAATAATATTGGTAGGGTTGGCTGGTCCTTCGGGGGCTGGGAAGACTGTATTCACTGACAAAATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCAATGGACAATTACAATGATTCTAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACGGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGCTCAGGTTCCAATCTATGATTTCAAGTCCAGTTCTCGTATAGGATACAGGACAGTCGAAGTCCCGAGCTCCCGAATTCTGATCATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGACCTCTGCTGGACCTTCGTATATCTGTTACAGGCGGAGTTCATTTTGACCTGGTCAAGCGAGTTATACGAGACATTCAACGTGCTGGTCAACAACCTGCAGAAATCATTCATCAAATATCTGAGACGGTATTTCCAATGTACAAGGTCTTTATCGAGCAAGATCTGCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTGAAATCAGCAAGGAATGTTACATTTGAACAAATTAAAGCTGTTTTCTCTGAAGATTTTAAGGAAACAAATGAGCAGATTTATGACATATATCTTCTACCGCCGGGTGAAGATCCAGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGGAAATACTGTCTAATGTTTGAGGAATGGGTCACAGATAGTCCATTTGTCATTTCACCAAGAATATCTTTCGAGGTTAGTGTACGGCTCCTTGGTGGCCTTATGGCCCTGGGATACACTATAGCTACCATTCTAAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTGTCTGTGAAACTAGATTGGCTCGAGCAACTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGTGCAATTGTAAGATGCATAGCCCAGCAGCTCGGCATGGAAGGTTCCTATATTGCTCGTACATACATCGAGCAAATACAACTGGAAAAGATTGTAGATGAGGTTATGGCCCTTCCAGATGATTTAAAAACAAAGCTTGGCCTAGATGAGGATATGGTGTCTAGCCCAAAAGAAGCACTCTCTAAAGCCTTTGCAGATAGGGCTCCTATGAGAAAAACGCACACAAGTGGTATGTCCCGGTCGTATACAAGCCAAAGGGACAAAAATCTACTCAAACATACTCGATATGGTGCCAGCAACAAAGGTTTTGGTGAAAGAAATCCAGATTCCTCCATAGAGCTAACAAATGAGCTTTCAGAACAAATTTCTTCTCTCAATGATAGAATGGATGAGTTTACAAGTCGTATTGAAGAGCTGAATTCCAAGTTAAGCATCAATAAAAATTCTCCAACCCAACAAACCACAACACTCCAAGCTGAAGCCTGCAACGGTTCTGCTCCCACCTCTCATTTCATTACTAGTTTGGAAAGTGGTTCTCTAACTGGATCTATTATGAAGTCCTCATCTTCATTTCAATTAGCTAAGGAGACACCTTTAATGGATGAGATATTGGGTATTGCAAAAGGGCAGCGCCAGATCATGCTGAAAATAGACAACCTCAATAGCCTTCTCCATGAAATTGGAAACATGGGAGAAAGTTCTGGCCAAGCAAGATCCAACAGGACAAACATGTCTTCTGCTTCAGAATCCACTTCAGGCCGTGCCCTGCTTGTTCTCACTTTTGGTTGTGTTGGACTATTCTTGGTGAAGGGCTTGGTGTCTAGAACTTGA 1977 0.4148 MAQDTSAVDSHHRLPGLLKDQVCLVKRKDSDRYKIAPIQDQLSFEKGFFVVIRACQLLSQNNDGIILVGLAGPSGAGKTVFTDKIVNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSAQVPIYDFKSSSRIGYRTVEVPSSRILIIEGIYALSEKLRPLLDLRISVTGGVHFDLVKRVIRDIQRAGQQPAEIIHQISETVFPMYKVFIEQDLQTAHIKIINKFNPFTGFQSPTYILKSARNVTFEQIKAVFSEDFKETNEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYCLMFEEWVTDSPFVISPRISFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVSVKLDWLEQLNRQYVQVQGKDRAIVRCIAQQLGMEGSYIARTYIEQIQLEKIVDEVMALPDDLKTKLGLDEDMVSSPKEALSKAFADRAPMRKTHTSGMSRSYTSQRDKNLLKHTRYGASNKGFGERNPDSSIELTNELSEQISSLNDRMDEFTSRIEELNSKLSINKNSPTQQTTTLQAEACNGSAPTSHFITSLESGSLTGSIMKSSSSFQLAKETPLMDEILGIAKGQRQIMLKIDNLNSLLHEIGNMGESSGQARSNRTNMSSASESTSGRALLVLTFGCVGLFLVKGLVSRT 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0797 658 CDD UMPK_like 67 239 - -
Lele55g0797 658 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lele55g0797 658 Pfam CYTH domain 270 404 IPR023577 -
Lele55g0797 658 Gene3D - 253 413 - -
Lele55g0797 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 236 IPR027417 -
Lele55g0797 658 PANTHER URIDINE KINASE 32 423 - -
Lele55g0797 658 Coils Coil 497 524 - -
Lele55g0797 658 PRINTS Uridine kinase signature 65 82 - -
Lele55g0797 658 PRINTS Uridine kinase signature 132 147 - -
Lele55g0797 658 PRINTS Uridine kinase signature 188 198 - -
Lele55g0797 658 SUPERFAMILY CYTH-like phosphatases 263 407 IPR033469 -
Lele55g0797 658 Gene3D - 66 246 IPR027417 -
Lele55g0797 658 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0797 Lele-ChrLele55 5385660 5393429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0797 67 225 PRT Gene Family AT5G40870 27.976 9.76e-16 78.6