Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0788 ATGCAACCTGCTTCTTCCCTTGTAAATTGGCCTCATAGACTCATCAACTTTTTAACCCCTCTTTTGGATGGATTCAGACTTCGACAAGTCGCCTCGTTCTTTCATTTTCAAGAGAACTGTGGTTTAGGGGCTTGTGCAGAATTCAGTACAGTCTGAAATCATAAAAAAGACTCTCCCAGAGGCTGCTTTGGTGTACTTGTTGAGTTGGATATGTCTGACAAAGAAAATTTTGAGATAGATAGAAACGAGGATCATATGAGTTATTCATCTAGTATGCCCTCGGATTGGAGATTTGGTGTTCCTAATCCTGCAAATACATCAGTGGTTTTGGTGGATTCATATGTTCCAAGCTTCTGGGATCATCCTACCAGTTCCCAAAACTTGGGTTCGTGTGACATCAATGTGCAGAACAATGGTAGCTCCTCAAGCTCAGTTGGAAATAGAAAAGATGGCCTTGCCTTAGCTGGTCATGATAGAACACTTGAAATGGGTTGGAACCCAACAGCAAGTTCTATTTTAAAAGGGGATGCTGCTTTCTTACCAAACAGACCAACAATCTTCCCTCAGAGTTTGTCTCAGATTCCCACTGATTCTGCCTTTATTGAGAGAGCTGCAAGATACTCGTGCTTCAGTCAGTTCAATGGAGGGAATTTTAATAGTATGGTGAACTCATTTGGGATTCCCCAATCCATGGTGGGTCTGTATGCTGGACGGGATGTTCTTGCAGGCCATGGCTTAAAATCATCTCATGGAGCAAGATCTCAAGAAAGTGCTCAGGATGTTGCAGGTGAAGCTGCAAAAGACGTGTCTGTTTCTCCATCTTCTGTTCAGAATTTGGCCACTAAAGGAAGTAGCCCCCTCAAGAATGACAAGAGAAGTGAAAGCCTAGTGACATCTCAAGATGAAGCAAAACAGACTCATGGCAGGTCTACTAATGAGTCTGATAGATCAGAATCAAGTGGTGATGATGATGCTGGCGGTCAAAATGATATGCCTATATTGGAGGGTACAAGCGAGGAGCCTTCTAACAAAGGACTAAACACAAAGAAAAGGAAAAGAAGTGGACAGGATTCTGATAATGTAAAGGCCAACGGAGGTTCTGAACCACCAAGTGAAGCTGCAATGGAGAATTCTGAGAGCCGACAGAAGGGAGACCAACAACCAACTTCAACAACCAAGACTTTTGGGAAGAATACCAAACAGGGGTCTCAAGCTTCTGATCCACCAAAGGAGGAATACATACATGTTAGGGCTCGCAGAGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAAAGGATGAAATTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTGACTGGCAAGGCAGTTATGCTAGATGAAATCATTAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACTGTAAATTCACGGCTGGATTTTAATCTTGAAGGACTTATTGCCAAAGATATGCTTCAGCAACGGCCTGGCTGCTCATCTGCATTGAAGTTTTCTCCAGAAATGCCTATGGTTTTTCCTCCTTTACATCCATCTCAACCAGGCCTTCTACAGACAAATGTTCCCGGCATAGCGAACTCATCTGATATACTTCGTAGAACCATTCATCAACGGTTAACTCCCGGGGTTGGAGGATTCAATGATCCTAATCAGCTACCTGAGATGTGGGAGGATGAACTGCACAATGTTGTAACCAACTGCTCCACTGAGTAG 1764 0.4342 MQPASSLVNWPHRLINFLTPLLDGFRLRQVASFFHFQENCGLGACAEFSTVXNHKKDSPRGCFGVLVELDMSDKENFEIDRNEDHMSYSSSMPSDWRFGVPNPANTSVVLVDSYVPSFWDHPTSSQNLGSCDINVQNNGSSSSSVGNRKDGLALAGHDRTLEMGWNPTASSILKGDAAFLPNRPTIFPQSLSQIPTDSAFIERAARYSCFSQFNGGNFNSMVNSFGIPQSMVGLYAGRDVLAGHGLKSSHGARSQESAQDVAGEAAKDVSVSPSSVQNLATKGSSPLKNDKRSESLVTSQDEAKQTHGRSTNESDRSESSGDDDAGGQNDMPILEGTSEEPSNKGLNTKKRKRSGQDSDNVKANGGSEPPSEAAMENSESRQKGDQQPTSTTKTFGKNTKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFNLEGLIAKDMLQQRPGCSSALKFSPEMPMVFPPLHPSQPGLLQTNVPGIANSSDILRRTIHQRLTPGVGGFNDPNQLPEMWEDELHNVVTNCSTE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0788 587 Pfam Helix-loop-helix DNA-binding domain 425 473 IPR011598 GO:0046983
Lele55g0788 587 MobiDBLite consensus disorder prediction 244 427 - -
Lele55g0788 587 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 300 514 IPR024097 GO:0006355
Lele55g0788 587 Coils Coil 469 489 - -
Lele55g0788 587 MobiDBLite consensus disorder prediction 270 305 - -
Lele55g0788 587 Gene3D - 419 494 IPR036638 GO:0046983
Lele55g0788 587 MobiDBLite consensus disorder prediction 344 358 - -
Lele55g0788 587 CDD bHLH_AtBPE_like 412 497 - -
Lele55g0788 587 FunFam Basic helix-loop-helix transcription factor 419 491 - -
Lele55g0788 587 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 420 491 IPR036638 GO:0046983
Lele55g0788 587 MobiDBLite consensus disorder prediction 306 323 - -
Lele55g0788 587 SMART finulus 428 478 IPR011598 GO:0046983
Lele55g0788 587 MobiDBLite consensus disorder prediction 359 406 - -
Lele55g0788 587 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 422 472 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0788 Lele-ChrLele55 5294953 5297827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0788 69 581 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 44.847 3.72e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele55g0788 HLH 7.7e-06 No_clan