Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0762 ATGGATGATGGGGCCACTAAGACAGACTCCAAACATGTTCTATTACAACTACCTTTGGAATCTCCTCATAAGGACATGGAAATCTTTTCCGTAGAAAAAAGATTGCAAATTCAAGTCTGTCTTCAGCAAGGCAGGGACTCAGGTTATTTCAAAGAGATCAGTTTTTTGAGGCATATCCTGTGTGGTTCTTGTGCAACTGTGTTGATAAATCTTGAATTGGTACAGAAACATGGAATAACATATTCATCTTTACTAATGGAATCTTGGAGTTATGCCTCAGAAGAGAAAAGCTATTTGTTTTCAGATGAAATGGATTTCTCTCTGGAAGCTTATATGAGAAGTAGAAGAGCAATGGTTGAATGGGACAATAATAAAGCCTCTTATATCTTTGAGAAAGATGGGTTTATTTCAGATAAAGAGGTAATTAAAAGCGTTGAGTTTGTGGATTTGGGGTTTACTGATTTGTTCAGAAGGCCTGTTCATGGTAGCCAGCCACCACTGGAAACATCAAACTATGAACATGACAGTAATTCTAGGGAGAAAGTTAATTCCTCTACTCATGTTATTGCTCTAAATTCACCTTTGGGAGAAGTAGAATCTGAGTCAAGGCATTCATGTTCTCTAGTTGAATCTAAGATTCATGACTCTTCACTGATTGATTTAAAGCTAGGGAGATTAGGAGATTGTAAAGATTCGAGCAGTGATAAAAATGACAATGAGGGGTTCACTTTTCAACCTATGTATCCGGCGTCCGTGCTTACGAAGAGAGCTCGAACTTCTAGTTTACCTAAAACACCTGTTTGTCAAGTTTATGGTTGTAACAAGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCACAAAGTTTGTGATGTTCATTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTGCTAGCTGAGTTTGATGATGGCAAGCGTAGTTGTCGTAGACGCCTAGCTGGACACAATGAACGTCGGAGGAAGCCTCAGTTTGATTACATCTCTGGTAAACCACAGAAGATACTGCAGTCATGTCAAGGTACCAAATATTTTGGGGCTTCATTACAGAAGAGACCCCAGTTTGCCTTTCACGACGTGTTTCAAGGTGGTGTTTTTTACTCGGGAAAGTATGAACAAAGAAATCATCAGATTGGAGACACCACATTTGAAGATGAATCAATTTACAGTTCTCAATTATCAAATGGTCAAGAGTTATCCAGGGCCTCCAACTTCAGAAGTTGTGCTCTCTCTCTTCTGTCAGCTCAGTCACAGGATCTAACAGCACGCTGCTCGGCTGGTTCCCTTATTTCTCAAGGCATCTGCACACAGCACAGTGATGGCCAAGTTTCTGAAACACCTTTTGTGATTAGCTCTCTGGATAAATTTGTCCCAAGTCAGTCCTTTTCATGTGAGATAAACTCCATGGAAGTTACCAAGAACAGACCCATAACGCCTTCTGATGTTGGTAATGCTCTTCAACCTGAAGTCCATGGAGATGATGATACTTACAAACCATCAGATTTGTTAAATGCCAAATATAGTCATTCTCCTGTCGGACATAGCTCCACCGTGGATCTGTTCCAATTGTCATCACATCTTCAAAGGGTGGAACGACAGAGAAATTATGTTCAAGTGAAGCATGAAAACGGGGACGGCTGCTTTTTTCCAACCATGTGA 1716 0.405 MDDGATKTDSKHVLLQLPLESPHKDMEIFSVEKRLQIQVCLQQGRDSGYFKEISFLRHILCGSCATVLINLELVQKHGITYSSLLMESWSYASEEKSYLFSDEMDFSLEAYMRSRRAMVEWDNNKASYIFEKDGFISDKEVIKSVEFVDLGFTDLFRRPVHGSQPPLETSNYEHDSNSREKVNSSTHVIALNSPLGEVESESRHSCSLVESKIHDSSLIDLKLGRLGDCKDSSSDKNDNEGFTFQPMYPASVLTKRARTSSLPKTPVCQVYGCNKDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPQKILQSCQGTKYFGASLQKRPQFAFHDVFQGGVFYSGKYEQRNHQIGDTTFEDESIYSSQLSNGQELSRASNFRSCALSLLSAQSQDLTARCSAGSLISQGICTQHSDGQVSETPFVISSLDKFVPSQSFSCEINSMEVTKNRPITPSDVGNALQPEVHGDDDTYKPSDLLNAKYSHSPVGHSSTVDLFQLSSHLQRVERQRNYVQVKHENGDGCFFPTM 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0762 571 Gene3D - 260 329 IPR036893 GO:0003677|GO:0005634
Lele55g0762 571 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 225 484 IPR044817 GO:0003677
Lele55g0762 571 ProSiteProfiles Zinc finger SBP-type profile. 265 342 IPR004333 GO:0003677
Lele55g0762 571 FunFam Squamosa promoter-binding-like protein 14 259 329 - -
Lele55g0762 571 Pfam SBP domain 268 341 IPR004333 GO:0003677
Lele55g0762 571 SUPERFAMILY SBT domain 266 347 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0762 Lele-ChrLele55 5087949 5093821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0762 219 569 SBP-box Gene Family AT1G69170 36.932 6.49e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele55g0762 SBP 3.9e-31 No_clan