Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0743 ATGATCAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGTGAGCTTTACTGTAGAAGAAGATGAGCGCTTGATAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAGATTTGTTCTGGGCCGGACTCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTGAGGAAGAAGATTCGAGATTGAAAAAAGCAATTGCCAAATATGGATTCTGCTGGTCAAAGGTTGCTGCCTATATGCCTCCACGAACTGACAGTCTATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCGGTAACTTTGTTGATCGAATTGGATATTGCTATAGGTATGCTGACGAGGTTGAGCCTTGTAGTGGACACGGTGCCAACAAGCCAAAGATTACTGAACCACATTTGGAGGACAACTCTGTTGAAGCTGTGCATGATCACTCCCCGCTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGGTGGACATAATAATATTGATAAGCTAATTGAGTCGAATCAAATGTGGGAGGGTTTTAATGAATTAGATGATGAGAGCCGTCGTTGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACAGATGGGCATTATGAGGAAATCTCTTCTGTGAACTCATTGAAACGCCAAACTGGAAGAAAGTCAATGCTATCTGCAAGTATATCTGAGAGTGTTACTGCATTTTGA 798 0.4361 MIRWKKSLCPDRKVSFTVEEDERLIVAVHLFGRKWNQIARFVLGRTQAQCRDRYVNSLDPSLKWGGWTEEEDSRLKKAIAKYGFCWSKVAAYMPPRTDSLCRKRWRVLFPDQVPMLQAARKMKKSALIGNFVDRIGYCYRYADEVEPCSGHGANKPKITEPHLEDNSVEAVHDHSPLDLVVTTTNGQGDLGGHNNIDKLIESNQMWEGFNELDDESRRCITPCENPEAGTTDGHYEEISSVNSLKRQTGRKSMLSASISESVTAF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0743 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele55g0743 265 CDD SANT 67 109 IPR001005 -
Lele55g0743 265 SMART sant 63 111 IPR001005 -
Lele55g0743 265 SMART sant 12 60 IPR001005 -
Lele55g0743 265 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 3 135 - -
Lele55g0743 265 SUPERFAMILY Homeodomain-like 12 105 IPR009057 -
Lele55g0743 265 ProSiteProfiles Myb-like domain profile. 12 58 IPR001005 -
Lele55g0743 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 53 IPR017930 -
Lele55g0743 265 CDD SANT 15 58 IPR001005 -
Lele55g0743 265 Gene3D - 9 63 - -
Lele55g0743 265 Gene3D - 64 111 - -
Lele55g0743 265 Pfam Myb-like DNA-binding domain 16 75 - -
Lele55g0743 265 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0743 Lele-ChrLele55 4979719 4980943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0743 3 134 MYB-Related Transcription Factor Family AT3G18100 55.639 4.20e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele55g0743 Myb_DNA-bind_6 5.1e-15 CL0123