Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0740 ATGCTTGCTCTTGCCCTCCCTTCCGCTGCGGTGCCGATGACCACGCCGACGAGACGACCGCCTCTTCCGACGCGCTTCGCAGTTGTGGCTCAGGGATTCCCTTCCTTTCTCCCCAAGCAAGTCCAACAAATCAAAGATCCTTTCGCTCAGAACTTCGCTCTAAGGATTCAGAGACTTCCCGTTCCGGTTAACTTCTCAGAAAATCCCATCATGAGTAGTTGCGTGAAGCCAGTGATGCAGAACAAAGCAAATCCAATAGTTCTTCTGCATAGTTTTGACAGCTCATGTTTAGAATGGAGATATGCGTATCCATTGATTGAAGAAGCTGGTTTTGAGGCCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAATCTTCCATTATGTGATGTGGCATCCAAGCGCCATCATTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCCATGATATTGGTAGGACCAAGCCTTGGTTCTGCTGTTGCCATTGACTTTGTCACCAATCATCCAGACGCTGTGGAAAAGCTTGTTTTGATTGGTTCCAGTGTATATGCAAATGGAACAGGACTACTAGCAACTTTACCCAGAGCGGCAGCTTATGCTGGGGTATACCTATTGAAGAGCGTCCCTTCGCGCTTATATGCGACCTATTTGATCTTCTCTGACGTATCATTTAGTACCAGTCTCGACTTGGCTAGTGTGGGTCGCTTGCATTGCTTATTGCCTTGGTGGGAGGATGCTACAGTGGATTTCATGGCTAGTGGCGGTTATAATGTTGCTTCTCTGATAAAAGAGGTAAAGCACAAAACTCTCATCATTTGGGGTGAGAATGATCGCATCATCAGCAATAAGTTTGCAGTGCGACTGCATTCTGAGTTGCCTGATGCAATATTACGCCAAATACCAAATTGTGGCCATCTCCCTCATCTGGAAAGGCCTGGTTCAGCAGTCAAATTGATTCTTGAGTTTGTTCAAAAGAGAGAAACCAACAAAGTAAATCACTGTGTTTCACATATATGA 1029 0.4558 MLALALPSAAVPMTTPTRRPPLPTRFAVVAQGFPSFLPKQVQQIKDPFAQNFALRIQRLPVPVNFSENPIMSSCVKPVMQNKANPIVLLHSFDSSCLEWRYAYPLIEEAGFEAWAIDILGWGFSDLENLPLCDVASKRHHFYQFWKSYIRRPMILVGPSLGSAVAIDFVTNHPDAVEKLVLIGSSVYANGTGLLATLPRAAAYAGVYLLKSVPSRLYATYLIFSDVSFSTSLDLASVGRLHCLLPWWEDATVDFMASGGYNVASLIKEVKHKTLIIWGENDRIISNKFAVRLHSELPDAILRQIPNCGHLPHLERPGSAVKLILEFVQKRETNKVNHCVSHI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0740 342 SUPERFAMILY alpha/beta-Hydrolases 83 328 IPR029058 -
Lele55g0740 342 PRINTS Alpha/beta hydrolase fold signature 110 125 IPR000073 -
Lele55g0740 342 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Lele55g0740 342 PRINTS Alpha/beta hydrolase fold signature 273 287 IPR000073 -
Lele55g0740 342 PRINTS Alpha/beta hydrolase fold signature 155 168 IPR000073 -
Lele55g0740 342 Pfam Alpha/beta hydrolase family 86 319 IPR000073 -
Lele55g0740 342 PRINTS Epoxide hydrolase signature 110 125 IPR000639 GO:0003824
Lele55g0740 342 PRINTS Epoxide hydrolase signature 169 182 IPR000639 GO:0003824
Lele55g0740 342 PRINTS Epoxide hydrolase signature 90 108 IPR000639 GO:0003824
Lele55g0740 342 PRINTS Epoxide hydrolase signature 304 326 IPR000639 GO:0003824
Lele55g0740 342 PANTHER HYDROLASE 31 330 - -
Lele55g0740 342 Gene3D alpha/beta hydrolase 76 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0740 Lele-ChrLele55 4949443 4953912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0740 85 327 Acyl Lipid Metabolism Gene Families AT3G10840 23.810 3.24e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0749 53 17481583 17489792 Lele55g0740 55 4949443 4953912 hybridization
Lele54g0740 54 14319043 14322966 Lele55g0740 55 4949443 4953912 hybridization