Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0730 ATGGACCCAGTTGACGACCTTACTGCATATGTGCGGATCCACATGCCGATGACTGCACCTTACGATGACGTGTACACCGATGGCTGGGCTACCTCGATGACGTATCCGTTAACGTGGAGGCCAACTCAGTTGGCACCTCGTCTTGATGATGATAGCTTCTATGTTGACGAGGTCGTCCATGCAGCCAATGACTCAGTAAACATCAAATTCCCTAGAAATTGCTCTGAAACATGGAACCCGAGCCTTCTTTCCAGCTTCCCCAGTGATCATTGCTTTCCCGGTGTTATGGATTCCGATATATGTCGCTGGATTCTAGAGTTTCTCCTCAGGAGTTCCGTTCCAGATTCATTCATCAGGAAGTTTTGGAATGTTTTACCCCTCTCTGGTATCGATTCGCGGCTGTGGAAAACATTGGCTCTCAGGTCTATTCAGTCGGAGGTGGCTACGGCATCATTTACAGAAAACTCACTGGAATGTCTAGAGGTCATTGAAGAAATCGACAGGCTTGATGGCATTGCAATCACACAAGCCATGAAGGAGGCATATGGTGCTGTTGCCGTGGAGTGCAGTGTCACGTACCTTGACGCATGCCCAGATAAAAACACCCTCGGCTTGTATGACGATGCTGTCAATAGGATTTGGAGGGGCCGAGTTCGGCAAATGATGGAGGCGATGGCGTTAGGGAAGAGGAATCACTTATTCACGGCTGAGTTGATACGGTGGAAGGACGTTATAGAGTCTGCACGCTGGGATGCAGAGGTGTGCGGGAGGTTAATGAACATGAATACCAGACAAAATGCCCTCGATAAGGTTAGGGTTTATCTAAAAGAAACTTGGGCATCCATGGGCCCTTGTTTTCTTGAGTTAGCAGCTTCATTATCTGAAGAGAAGGGTTTGGGAAGTTCAAGAGGGGATAAGATGGGTCACGCGGAGCCTCCTGCTAGTGTACCGAATGAAGTTTGTGACAAGGCTGCTTCTGAATCTGGGATGGTCTTTGATAAAACTAATGTGTGTAAAGGAAGGTTACATTGTTCAACTAACACGACTGAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGTATAGTGCTGCAATCTGCGTGGAGAAGGCGCCAGTGGCAGGTGAGAATCAAGATAGTGAGCAATTGGGAAGGAGAGTTGGGTCTTCTGTTGGTGGAAATCAGGTATTGGGTGGGGCTGAATTGCCTCAAAGGATAAATGAAGCAATTCAAAAGGGCAAGCTGCCACTTGAACATAATAATGTCTTATTAGGTGGGGTCGGCTATATGGATCGCACGACTCTCTCTACACGTAGAGGAGTTAAAATTTCTGATGCTGAGAGAGTGGTGCCAGTGACTGTTTGTGGCAAAGATCATAATGCATCTAGTATTCAAGTTGAAAAACTTCGGAAATCTCTCATGTCAAGTTCTTTGGAGTTGCGAGCATTGGTGAAGGATCCTCTTCCTGATGCATTGCATAAATCTGACATTGTAAGATGTGAATTATCAACGAAGGGTGTGAATCACGAGCCTCCTTTTGAAAACCAGAGTACAGTTGTAAATGTACCAGAACAAAATACTTGCAGGAGCATGGTGATTTATCAACCTATCAATGATATTGTAAAGAAACAGTCTTCTGCTAATTGCAATAATGTTCACCGTCCCAGCTTGATGGGACGAAATAGTACTGCCCATACTTATGAGTGGGATGATCCATTTAATGGCTTGCCTGTGGGAAGCCCAAATAAAAGGAGGAGAAAGACCAGATGGAATTCTGAAGAAGAGGATGCATTAAGGGCTGGTGTAAAGAAGTTTGGCAAAGGAAACTGGAAGCCAATCCTAAGATTTTACAGTGAGGTATTTGCAAAGACAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTAG 1923 0.4524 MDPVDDLTAYVRIHMPMTAPYDDVYTDGWATSMTYPLTWRPTQLAPRLDDDSFYVDEVVHAANDSVNIKFPRNCSETWNPSLLSSFPSDHCFPGVMDSDICRWILEFLLRSSVPDSFIRKFWNVLPLSGIDSRLWKTLALRSIQSEVATASFTENSLECLEVIEEIDRLDGIAITQAMKEAYGAVAVECSVTYLDACPDKNTLGLYDDAVNRIWRGRVRQMMEAMALGKRNHLFTAELIRWKDVIESARWDAEVCGRLMNMNTRQNALDKVRVYLKETWASMGPCFLELAASLSEEKGLGSSRGDKMGHAEPPASVPNEVCDKAASESGMVFDKTNVCKGRLHCSTNTTEEGLVVSDGSALYSAAICVEKAPVAGENQDSEQLGRRVGSSVGGNQVLGGAELPQRINEAIQKGKLPLEHNNVLLGGVGYMDRTTLSTRRGVKISDAERVVPVTVCGKDHNASSIQVEKLRKSLMSSSLELRALVKDPLPDALHKSDIVRCELSTKGVNHEPPFENQSTVVNVPEQNTCRSMVIYQPINDIVKKQSSANCNNVHRPSLMGRNSTAHTYEWDDPFNGLPVGSPNKRRRKTRWNSEEEDALRAGVKKFGKGNWKPILRFYSEVFAKTGRTEVDLKDKWRNLTR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0730 640 Gene3D - 580 640 - -
Lele55g0730 640 SMART sant 586 640 IPR001005 -
Lele55g0730 640 Pfam Myb-like DNA-binding domain 588 638 IPR001005 -
Lele55g0730 640 CDD SANT_TRF 589 640 - -
Lele55g0730 640 PANTHER MYB TRANSCRIPTION FACTOR 96 640 - -
Lele55g0730 640 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 582 640 IPR017930 -
Lele55g0730 640 ProSiteProfiles Myb-like domain profile. 582 639 IPR001005 -
Lele55g0730 640 SUPERFAMILY Homeodomain-like 584 639 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0730 Lele-ChrLele55 4878655 4883662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0730 590 638 Single Myb Histone (SMH) Gene Family AT1G15720 63.265 1.51e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele55g0730 Myb_DNA-binding 5.7e-08 CL0123