Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0707 ATGTCGGACGAAGAACATCATTTCGAGTCCAAAGCCGATGCCGGAGCTTCAAAGACCTTCCCTCAGCAGGCCGGTACTATCCGTAAGAACGGTTACATTGTGATTAAAAACAGGCCGTGCAAGGTTGTGGAGGTTTCAACTTCCAAAACTGGGAAGCATGGACATGCTAAGTGTCACTTTGTTGGCATTGACATTTTTACTGGGAAAAAGCTGGAAGATATCGTTCCTTCTTCACACAACTGTGATGTCCCACACGTCAACCGCACTGATTACCAGCTGATTGATATCTCAGAGGATGGATTTGTGAGTTTGCTGACTGACTCCGGTGGTACCAAGGATGATCTGAGGCTTCCCACTGATGAAGCTCTGCTTACACAGATCCAGGGTGGCTTTGCTGAGGGTAAAGATCTGGTTGTGAGTGTTATGTCTGCCATGGGTGAGGAGCAGATTTGTGCACTGAAGGATATTAAGTAA 474 0.4684 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGGTKDDLRLPTDEALLTQIQGGFAEGKDLVVSVMSAMGEEQICALKDIK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0707 157 TIGRFAM eIF_5A: translation elongation factor IF5A 18 153 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele55g0707 157 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele55g0707 157 SMART eIF_5a_2 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele55g0707 157 Gene3D - 1 85 IPR014722 -
Lele55g0707 157 PIRSF Transl_init_eIF5A 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele55g0707 157 CDD S1_eIF5A 86 156 - -
Lele55g0707 157 Gene3D - 86 157 IPR012340 -
Lele55g0707 157 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
Lele55g0707 157 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
Lele55g0707 157 SUPERFAMILY Nucleic acid-binding proteins 86 156 IPR012340 -
Lele55g0707 157 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 156 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele55g0707 157 MobiDBLite consensus disorder prediction 1 21 - -
Lele55g0707 157 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele55g0707 157 FunFam Eukaryotic translation initiation factor 5A 86 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0707 Lele-ChrLele55 4737656 4739382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0707 1 156 Eukaryotic Initiation Factors Gene Family AT1G13950 88.462 5.50e-101 285