Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0706 ATGGGTGGAATTGGTGACCAACCACCACCGTCGTCGCCGCCGCCAGGCACTTCCATCGACGAGCTTTTCAATGGCGGCTCCTCTGCCAGCGCCGCCGGATTTGGCTTCAGTCCTGGTCCCATGACTCTCGTTTCCAATTTCTTCAACGGCAACGACGACTTCAAGTCCTTCTCCCAACTTCTCGCCGGCGCCATGCCGTCGGATGGTGGAGCCGTCACTGGACTTAAACAGGATAGGCCTTCCGTTGAGCATCAGTCCCCGATGTTCATGCTTCCGGCGAGGCTTTTCGCAGCTTCTCAGGTCTCAGCTCAGGTCGTGCAGGTCAACGAGAATCCATCTTCGTCTTTATCGGCAGCTTCCATGGCTAAACAAGCTCATCAAATACCACATTCTGGTACGACGACGTCGTCGTCAATGAAGGAATGTCCTGATGATGGATTCAACTGGCGTAAGTATGGTCAAAAACAGGTGAAAGGCAGTGAATTCCCTCGGAGTTATTACAAGTGCACGCATCCGAATTGCCCCGTGAAGAAGAAGGTGGAGAGATCTCTCTACGATGACCATGTTGTCGCCATCATTTACAAAGGACAACATAATCATCAAGCTCCTCGCCCCACCACCACCAACAACAACAACAAGCACGCGAGTGAGAACTCAAATAATGTACGAGGAACAACAACGTGGGAGTCATCAACAGGTGAACAACAAGAAGCAGAAGGATCAAGTGAGAGTGAGGAAGCTGCAGATAATGAAATGGAGGAGAAAAATAATGATGAGCCTGAGCTAAAGAGGAGGAGGCAAGAAGGTATGGTGTCTGAGGGAGTAAGTTCGCATAGGGCAGCCATGGAACCAAGGATTATTGTGCAGACAACAAGTGAAGTTGACCTGCTTGACGATGGGTATCGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAACCCTTTCCCAAGCTACTACAAGTGCACGACCACGGGCTGCAATGTTAGGAAACATGTGGAGAGGGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGAAGGAAAACACAATCACGACGTGCCTGCTGCTAAACCTAACAGCCACACCATCGCCAACAATTCATCTGCATCACAGCTCAGAGCCCACAGTTTCAATGGCGGACCTATTGGGCCCCACCAACAGCAACAACAACAGACTGTTGCACGTCTTAGGCTCAAGGAAGAACGGATAACCTAG 1221 0.502 MGGIGDQPPPSSPPPGTSIDELFNGGSSASAAGFGFSPGPMTLVSNFFNGNDDFKSFSQLLAGAMPSDGGAVTGLKQDRPSVEHQSPMFMLPARLFAASQVSAQVVQVNENPSSSLSAASMAKQAHQIPHSGTTTSSSMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLYDDHVVAIIYKGQHNHQAPRPTTTNNNNKHASENSNNVRGTTTWESSTGEQQEAEGSSESEEAADNEMEEKNNDEPELKRRRQEGMVSEGVSSHRAAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHDVPAAKPNSHTIANNSSASQLRAHSFNGGPIGPHQQQQQQTVARLRLKEERIT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0706 406 MobiDBLite consensus disorder prediction 196 283 - -
Lele55g0706 406 MobiDBLite consensus disorder prediction 369 392 - -
Lele55g0706 406 MobiDBLite consensus disorder prediction 200 238 - -
Lele55g0706 406 MobiDBLite consensus disorder prediction 256 272 - -
Lele55g0706 406 FunFam WRKY transcription factor 130 204 - -
Lele55g0706 406 MobiDBLite consensus disorder prediction 239 255 - -
Lele55g0706 406 SUPERFAMILY WRKY DNA-binding domain 289 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 ProSiteProfiles WRKY domain profile. 292 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 SUPERFAMILY WRKY DNA-binding domain 142 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 Coils Coil 245 265 - -
Lele55g0706 406 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 380 IPR044810 GO:0003700
Lele55g0706 406 Pfam WRKY DNA -binding domain 298 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 Pfam WRKY DNA -binding domain 144 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 Gene3D WRKY domain 282 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 Gene3D WRKY domain 130 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 ProSiteProfiles WRKY domain profile. 138 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 FunFam WRKY transcription factor 57 283 356 - -
Lele55g0706 406 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 SMART WRKY_cls 297 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele55g0706 406 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0706 Lele-ChrLele55 4731185 4733646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0706 9 61 WRKY Transcription Factor Family AT2G03340 54.717 1.75e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele55g0706 WRKY 1.3e-25 CL0274