Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0701 ATGGAAGAAACAGAGGAGTCAAATGGCAAGAAGAAATTCACAGCCCAAAGAAGAAGAAGCTTGAGGGTTGGAGCAAACTCTCATGAGCATTATTATTATTATCAGAATCATAATCAGTTTGGTGGGTTATGTAACCAGAATAAGTATCAGAGTTACAGTCCGGCTCTTCTTCCTCTGCCTTCTCTCTTACCTCTTCAACTAGCTTTGACGCAACCGTTCCCTCAAAACCAAACCATCAAATCAAAAACCCATTTCCAGAAATATCCATGCAAACTCAATAATAATTCTCCTTTAGCTGCTTCCTCAGATGACAACAACAAGGTCTCATCAGAAGAACCCACTGTTTCTCCTGTTCAAGCTAAAGCCAAGACATCACTTGAAGGAGATGAAGGGAAGAAATTTATTCCTGCAAGAAAACCACAGGCATTAATTGCTGCAAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTCGCCAACCACTTCCTCGTGAAATTCGATTCGTCGCAAAAGATATACCATTACAATGTTGAAATCACTCCTAATCCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGGTTAACAACAATTCTGTTAGTTTTTCTGGTTCTGTGCCTGCATATGATGGGAGGAAGAATCTTTACAGCCCAGTGGAATTCCAAAATGATAAGCTTGAGTTCTACATAAACCTTCCAATCCACTCTAGCAAATCGGCATTACCTTACGGAGAAATCTGTGACTTGAAAGAGAAGAAAGAACAGCTTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAAGATCAATGGGAAGGAATTGAGTAACTACTTGAGCAAAGAGGGAGATGATTGGGTCCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTCTGAGGGAGAACCCGACCGAAAAGTGTATACCTGTAGGTAGATCATTTTATTCAAATTCAATGGGAAAGACCAGGGAGATAGGAGGAGGAGCTGTTGGATTCAGAGGTTTCTTTCAGAGTCTTAGGCCAACACAACAAGGACTTGCCCTCAATGTAGATTTCTCTGTGACAGCATTCCATGAGAGCATAGGAGTTATTCCATACTTGCAGAAGCGACTGGAGTTTCTTCGGGACCTTTCTGAAAGGAAGACAACAAGTTTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAATATCAGGGTCTTTGTTTGCCATAGAGAAACCGTGCAGAGATACCGAGTCCATGGCTTAACCGAAGAAACAACAGAAAATCTTTGGTTTGCTGACAGGGATGGAAAGAATTTAAAGCTTGTGAGTTATTTCAAAGATCACTATAACTATGACATTCAATTCAGAAAATTGCCATGCTTGCAAATCAGTAGGAGTAAACCATGTTATCTCCCCATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTTCTTGGCAAGCTGTCTGATGATCAGACCGCAAAGATACTGAAGATGGGCTGCCAAAGACCAAGAGAACGGAAAGCCATCATTGAAGGAGTCATGAGAGGGAATGTAGGGCCTACCAGTGGCAACCAGGAAGGAGAATTCAAACTCAAAGTGTCACGCAAAATGACAAGGCTGACCGGTAGGATTCTTCACCCTCCCAAGCTTAAGCTCGGAGATGGAGGTCGAGTTAGAAATCTGTTTCCTTCCCGTCATGACCGCCAGTGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAACGGTGGGCACTGATAAGTTTTGGCGGCACACCAGAGCAGAAGTCTAATATCCCAAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGGATTTTCCTTAACAAGAATACAATCATTAGTCCTCAGTTTGAATCAAGTCAGGTTCTTAACAATGTTAACCTTTTGGAATCTAAGCTCAAGAAAATCCAGAGAACTGCCTCAACCAATCTCCAGCTGCTTATTTGCATAATGGAGAAAAAACACAAAGGATATGCAGACCTGAAACGAATCGCTGAGACTAGTGTTGGGGTTGTAAGCCAATGCTGCTTATATCCAAATCTCATCAAGCTAAGTTCACAGTTTTTGGCTAATTTGGCCTTAAAAATCAATGCCAAGGTTGGTGGATGCACAGTTGCTCTTTACAATTCTCTTCCTTCTCAAATCCCAAGACTGTTTCAGATTGATGAGCCTGCCATTTTTATGGGTGCTGATGTAACACATCCTCATCCACTCGACGATTTCAATCCATCTATCGCTGCTGTTGTCGGCAGCATGAACTGGCCAACAGCAAACAAATACATCTCAAGAATAAGGTCTCAAACTCACAGACAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAATTGCTTGATGATTTTTACCAGGAAGTAAAGAAACTTCCTGGGAGAATAATCTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTACTGGAAGAGGAATTGCAATCCATCAGAGTGGCATGTTCCAAATTTCCTGATTACAAACCATTCATTACTTTCGCGGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCTGTTGAAACAGACCAATCCTCCAACCAAAACCATTTTTTATATGAGAATATTCCCCCTGGGACTGTGGTTGATTCTGTGATCACTCACCCAAAAGAATTTGATTTCTATCTTTGCAGCCACTGGGGTGTGAAAGGAACAAGCAGGCCAACTCATTACCATGTTCTGTGGGATGAAAACCAGTTCACTTCTGATGAATTACAGAAGCTGGTTTACAATTTATGTTACACCTTTGTGAGATGCACCAAGCCAATTTCTTTGGTCCCCCCAGCTTATTATGCACATTTGGCTGCTTACAGAGGTAGACTCTACCTAGAGAGATCGGAGTCTTCAGCTTTATACAGAAGTTCATCTACATTATCAAGAGCTGCCCCTCCAATGATAGCACCTTTACCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAA 3036 0.416 MEETEESNGKKKFTAQRRRSLRVGANSHEHYYYYQNHNQFGGLCNQNKYQSYSPALLPLPSLLPLQLALTQPFPQNQTIKSKTHFQKYPCKLNNNSPLAASSDDNNKVSSEEPTVSPVQAKAKTSLEGDEGKKFIPARKPQALIAAKRPDSGGKEGSVISLLANHFLVKFDSSQKIYHYNVEITPNPSKEVAREIKQKLVNNNSVSFSGSVPAYDGRKNLYSPVEFQNDKLEFYINLPIHSSKSALPYGEICDLKEKKEQLKLFRINIKLVSKINGKELSNYLSKEGDDWVPLPQDYLHALDVVLRENPTEKCIPVGRSFYSNSMGKTREIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSERKTTSLTGEERKEVEKALKNIRVFVCHRETVQRYRVHGLTEETTENLWFADRDGKNLKLVSYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGNVGPTSGNQEGEFKLKVSRKMTRLTGRILHPPKLKLGDGGRVRNLFPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTIISPQFESSQVLNNVNLLESKLKKIQRTASTNLQLLICIMEKKHKGYADLKRIAETSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQIDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIRVACSKFPDYKPFITFAVVQKRHHTRLFPVETDQSSNQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESSALYRSSSTLSRAAPPMIAPLPRLSENIKKLMFYC 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0701 1011 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 140 974 - -
Lele55g0701 1011 FunFam Protein argonaute 7 361 487 - -
Lele55g0701 1011 FunFam protein argonaute 10-like 730 1011 - -
Lele55g0701 1011 ProSiteProfiles Piwi domain profile. 662 972 IPR003165 GO:0003676
Lele55g0701 1011 SUPERFAMILY Ribonuclease H-like 647 972 IPR012337 -
Lele55g0701 1011 Gene3D paz domain 360 487 - -
Lele55g0701 1011 SMART PAZ_2_a_3 374 514 IPR003100 GO:0005515
Lele55g0701 1011 Pfam Piwi domain 663 969 IPR003165 GO:0003676
Lele55g0701 1011 CDD Piwi_ago-like 532 971 IPR045246 -
Lele55g0701 1011 MobiDBLite consensus disorder prediction 96 128 - -
Lele55g0701 1011 Pfam Argonaute linker 1 domain 315 364 IPR014811 -
Lele55g0701 1011 FunFam Argonaute 10 548 724 - -
Lele55g0701 1011 Gene3D - 734 1011 IPR036397 GO:0003676
Lele55g0701 1011 Pfam N-terminal domain of argonaute 159 305 IPR032474 -
Lele55g0701 1011 SMART DUF1785_2 314 366 IPR014811 -
Lele55g0701 1011 ProSiteProfiles PAZ domain profile. 374 483 IPR003100 GO:0005515
Lele55g0701 1011 SMART Piwi_a_2 662 972 IPR003165 GO:0003676
Lele55g0701 1011 Pfam PAZ domain 378 499 IPR003100 GO:0005515
Lele55g0701 1011 SUPERFAMILY PAZ domain 361 519 IPR036085 GO:0005515
Lele55g0701 1011 CDD PAZ_argonaute_like 377 482 - -
Lele55g0701 1011 MobiDBLite consensus disorder prediction 96 121 - -
Lele55g0701 1011 Gene3D - 548 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0701 Lele-ChrLele55 4692562 4696278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0701 112 1011 Eukaryotic Initiation Factors Gene Family AT1G48410 41.489 0.0 651