Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0688 ATGAAGTCATCGTCGTGCTGCGAGAAACTAGAAGGGTTAAAGAAAGGACCATGGACTCCTGAAGAAGACGAGAAGCTCATGTCTTACATTCAACAACGTAACACGGCCATGGAAACTGATCTTCCTTGCCTGCAAAAGCTGGCCTGATGGTCGGCCATAGCACATCACTTACCAAAGGGAACAGAGACAATGAAATCAAGAACTATAGGAACACCTGCCTTAAGAAGAGGCTCACCAGAAGGGGTATCAACCCTAACACCCACAAGCCCATCAACACCGCCGTCAACGGCCAGTTAA 297 0.4815 MKSSSCCEKLEGLKKGPWTPEEDEKLMSYIQQRNTAMETDLPCLQKLAXWSAIAHHLPKGTETMKSRTIGTPALRRGSPEGVSTLTPTSPSTPPSTAS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0688 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 47 - -
Lele55g0688 98 ProSiteProfiles Myb-like domain profile. 10 68 IPR001005 -
Lele55g0688 98 MobiDBLite consensus disorder prediction 81 98 - -
Lele55g0688 98 SUPERFAMILY Homeodomain-like 12 62 IPR009057 -
Lele55g0688 98 MobiDBLite consensus disorder prediction 1 21 - -
Lele55g0688 98 MobiDBLite consensus disorder prediction 61 98 - -
Lele55g0688 98 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Lele55g0688 98 Gene3D - 12 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0688 Lele-ChrLele55 4597759 4598436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0688 1 31 MYB Transcription Factor Family AT4G05100 70.968 5.30e-10 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele55g0688 Myb_DNA-binding 2.5e-07 CL0123