Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0687 ATGGTGAAGTCATCGTCGTGCTGCGAGAAACTAGGAGGGTTCAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCATGGCCTATATTCAACAACACGGCCATGGAAACTGGTCTTCCTTGCCTGCTACAGCTGCACATCACTTGCCAAAGAGAACAGACAATGAAATCAAGAACTATTGGAACACCTGCCTTAAGAAGAGGCTCACCAGAATGGGTATCAACCCTAACACTCACAAGCCCATCCACACCGCCGTCAACGGCCAGCAGTCGAAGGACTCGGCCAACCTCTGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAAGCCGAAGCCAGGCAAGTCAAACAATATTCCAAGCTGCAGCTCCAGAACCAGCTCGGCTCCTCCTCCTCTTCCCAGCCTTTACTCACTCGGCTCGTCCCCAACAGGGTCACACCTCGGCCATCACCACCTCCGTGCCTCGACGTGCTCAAGGTAATCCGGGCATTCTCAAGCTCAATTAGAGGTCTCTAA 519 0.5356 MVKSSSCCEKLGGFKKGPWTPEEDQKLMAYIQQHGHGNWSSLPATAAHHLPKRTDNEIKNYWNTCLKKRLTRMGINPNTHKPIHTAVNGQQSKDSANLCHMAQWETARLEAEARQVKQYSKLQLQNQLGSSSSSQPLLTRLVPNRVTPRPSPPPCLDVLKVIRAFSSSIRGL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0687 172 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 46 133 - -
Lele55g0687 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 70 IPR017930 -
Lele55g0687 172 Pfam Myb-like DNA-binding domain 16 65 IPR001005 -
Lele55g0687 172 CDD SANT 18 64 IPR001005 -
Lele55g0687 172 Gene3D - 14 72 - -
Lele55g0687 172 SMART sant 15 68 IPR001005 -
Lele55g0687 172 ProSiteProfiles Myb-like domain profile. 15 66 IPR001005 -
Lele55g0687 172 SUPERFAMILY Homeodomain-like 14 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0687 Lele-ChrLele55 4585409 4587172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0687 5 136 MYB Transcription Factor Family AT5G15310 46.703 5.34e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele55g0687 Myb_DNA-binding 6.3e-14 CL0123