Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0685 ATGGCCACGCATGTCCAGATTATTCAACCATTAACAATGGAGCAGGATCTTCCTCCAGGCTTCAGGTTTCATCCCACAGATGAAGAACTCATCGTCTATTACCTCTGTAACCAGTACACATCAAAGCCATGCCCTGCTTCATCTATCATCCCAGAAGTTGATATCTATAAATTCGATCCTTCCGACTTGCCTAAGAAGGCAGGGTATGGAGAGAAGGAATGGTATTTCTTTAGCCCAAGAGAGAGAAAGTACCCTAATGGAGTGAGGCCAAACAGAGCCACTGTGTCTGGTTATTGGAAGGCGACTGGGACAGATAAAGCTATACATAGTGGTTGCAAGCCTATTGGGGTGAAGAAATCTCTGGTTTTCTACAAAGGGAAGCCACCAAAAGGAATCAAAACTGGTTGGATCATGCATGAATATCGACTCGTTGATCAATCCACAACATCACAACATCATGTTGGATCCATGAGATTGGATGACTGGGTTCTGTGCAGGATCTATAAGAAGAAGAAGCAGGGGAGAGAGGAATTTCCCAGTAATCATCAGAATGCAAGAGATCAAATGATGGATAATAATTATCTGGGTTCATCAGTTTCACAGTTGTTTTCCGATGGACGCTATAATAATTATTCAACCTTTGATCTTCAAAATAACGTTTCTTCGTCGAATTCTGGAATAGTAGAAGACTACTCCTTTGTAAAACCTCAGATGTTTGCAGAAGATGATTATGGAGGGCAGTTTCAAGCTACGATGAAACAGAGTAGCAGCATCGTCCACAGCAACCAACCAATGTTTGTGAACCAAGTGTATCATCTTTGA 822 0.4197 MATHVQIIQPLTMEQDLPPGFRFHPTDEELIVYYLCNQYTSKPCPASSIIPEVDIYKFDPSDLPKKAGYGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIHSGCKPIGVKKSLVFYKGKPPKGIKTGWIMHEYRLVDQSTTSQHHVGSMRLDDWVLCRIYKKKKQGREEFPSNHQNARDQMMDNNYLGSSVSQLFSDGRYNNYSTFDLQNNVSSSNSGIVEDYSFVKPQMFAEDDYGGQFQATMKQSSSIVHSNQPMFVNQVYHL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0685 273 FunFam NAC transcription factor 26 174 - -
Lele55g0685 273 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 221 - -
Lele55g0685 273 SUPERFAMILY NAC domain 6 170 IPR036093 GO:0003677|GO:0006355
Lele55g0685 273 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele55g0685 273 Gene3D NAC domain 26 175 IPR036093 GO:0003677|GO:0006355
Lele55g0685 273 ProSiteProfiles NAC domain profile. 17 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0685 Lele-ChrLele55 4568023 4569217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0685 11 171 NAC Transcription Factor Family AT1G69490 77.640 8.48e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele55g0685 NAM 1.8e-38 No_clan