Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0674 ATGAAGGCAACTTGGCGAAACTGCCTCATATATTCTTCACAAGAACACTCCAATGCTCTTACCTGTTCTGATCTCTCGTCTTCTTCCATGGGGATGGTTTATGCAGACATGGGTTCTCTCTCTCTCTCTTCTTCTTCTTCTGAAATGGGAAATAACAATATTGGGGGAACCAGCTGGGGTACTATTCCCTTTATTAGGGATCATCACCTTCTCAACAACAACAACAACACTGCCACCACCGATAATATTGATAATGATGCTTTGGAGTGTAACGCTTCTGAATCTAGTACTGATCACGAGAATCTCATAGATCATACCCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCTGATTCTGGCCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGACCTGCAGAAGATGCCAAGCTCAAGGAGCTCGTTGCCCTCTATGGCCCTCAGAACTGGAACCTCATAGCAGAAAAATTGGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCGAGGATAAACAGGAGAGCATTCAGTGAAGAGGAAGAAGATAGATTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCGAGGCTATTCCCAGGAAGAACAGATAACGCAGTGAAGAATCACTGGCATGTTATAATGGCAAGGAAGTATAGAGAACAATCAAGTGCTTACAGAAGGAGAAGATTAAGCCAATCTGCAAGTTACACAAGATCATCAATGGAGGACCAGAATTCAAGTAGAGGAAACTCAGGGACGACAGAACCCCCACCACCTCCGCCTTATTGTCTTGTTCCTAATAACAGTAACATTATGGCTAGTTTTCCATATGCTCACTTCCATGGAGCTAATGGTGGGGTTGACTATGGCCACAATGCTTCTTCTCCCCACATGACTTCTGGATTAGAAGCATTCTCCAGCACCTGCAAACAGGCCCCTCACACTCCCAACACCTTTTATTCTCATCATCATCGTCCATGTTTTGATGTCATCTCAGGGGTCAGAGGCAATGAAATGGTGGGAAGGGGTTTTGGGCAGAGTATATACAGGGAAAGCAGGCCAAGTGATCATGAACTTCATTCTCTCAATGGCTTCTTCTATCCTCAAGAAGATAATTTCAACCCATATATGATGCCAATAATGCAGCAGCAACAACCAACACAGTCAAACTCAAACATGATGAATCCCAGTTTTCACAGCTTCTCATCATCAAATTCCATGCCTCCAAATGTTTCCTCCGGCGAACCGTCATCATCAGAGAACAGAGATAAAGTAGCGCTGAATCGCCCTTCTCCATTTATCGACTTTCTCGGGGTAGGAGCCACATAA 1374 0.4461 MKATWRNCLIYSSQEHSNALTCSDLSSSSMGMVYADMGSLSLSSSSSEMGNNNIGGTSWGTIPFIRDHHLLNNNNNTATTDNIDNDALECNASESSTDHENLIDHTQENPNENSGVSTGKEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQSASYTRSSMEDQNSSRGNSGTTEPPPPPPYCLVPNNSNIMASFPYAHFHGANGGVDYGHNASSPHMTSGLEAFSSTCKQAPHTPNTFYSHHHRPCFDVISGVRGNEMVGRGFGQSIYRESRPSDHELHSLNGFFYPQEDNFNPYMMPIMQQQQPTQSNSNMMNPSFHSFSSSNSMPPNVSSGEPSSSENRDKVALNRPSPFIDFLGVGAT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0674 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 179 233 IPR017930 -
Lele55g0674 457 SUPERFAMILY Homeodomain-like 132 225 IPR009057 -
Lele55g0674 457 PANTHER MYB PROTEIN-RELATED 122 287 - -
Lele55g0674 457 Gene3D - 185 260 - -
Lele55g0674 457 FunFam MYB transcription factor 132 183 - -
Lele55g0674 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 178 IPR017930 -
Lele55g0674 457 MobiDBLite consensus disorder prediction 239 277 - -
Lele55g0674 457 CDD SANT 135 176 IPR001005 -
Lele55g0674 457 MobiDBLite consensus disorder prediction 242 267 - -
Lele55g0674 457 MobiDBLite consensus disorder prediction 93 127 - -
Lele55g0674 457 MobiDBLite consensus disorder prediction 399 440 - -
Lele55g0674 457 FunFam MYB transcription factor 185 256 - -
Lele55g0674 457 ProSiteProfiles Myb-like domain profile. 179 229 IPR001005 -
Lele55g0674 457 MobiDBLite consensus disorder prediction 399 444 - -
Lele55g0674 457 CDD SANT 186 226 IPR001005 -
Lele55g0674 457 ProSiteProfiles Myb-like domain profile. 132 178 IPR001005 -
Lele55g0674 457 Pfam Myb-like DNA-binding domain 132 178 IPR001005 -
Lele55g0674 457 Pfam Myb-like DNA-binding domain 184 227 IPR001005 -
Lele55g0674 457 Gene3D - 132 183 - -
Lele55g0674 457 MobiDBLite consensus disorder prediction 107 124 - -
Lele55g0674 457 SMART sant 131 180 IPR001005 -
Lele55g0674 457 SMART sant 183 231 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0674 Lele-ChrLele55 4487173 4488818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0674 30 244 MYB Transcription Factor Family AT1G69560 54.464 5.98e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele55g0674 Myb_DNA-binding 1.7e-14 CL0123