Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0671 ATGGCTTCTGAAGCCAATGTTTCTGAGAATTCGTCCCTCTTTGAAAGCTTGCTTGGATTCAGAGAGCTCTCTGTTTTCTTACCCTTCATCTTAGGCTTCTCCACCGATTCTTCCAGACAAGACAGTCAAGACCCAGATCAGGAAACCACAAATTCAGAAAATAGTAACACCCATGGCGAAAGAGTCGTCTTGATCAACCCCTTTACGCAAGGCATGGTGGTGATTGACGGTAATTCGAGCCTCGAGACTCTGTTCCACGAAATTGGTATGAAAAATGGGCAACCGCCGGCGTCGAAGGAATCTATAGACGCGATGCCGAGTGTAGAAATCGGAGAAGGAGAAGGCTGCGGCGAGTGTGTGATTTGTTTGGAGGAATGGGAGGTTGGTGGGGTGGCGAAAGAGATGCCTTGTAAGCACAAGTTTCATCAGAACTGTATAGAGAAGTGGTTAGGAATCCATGGGTCTTGCCCCATATGTAGATACCAGATGCCTGTGGATGAGAAAGAAGTGGGCAAGAGAGATGAAGATGAACAAGAATCAGGAGAAGGAGGAGAGAGAAGGAGCGTTGGCAGAGAAATTTGGGTGAGCTTCTCCTTTAGAAGTCAGAATACGAACCAAGCTCCTTCTGATAATTCCAGTGATCCTTCATCAAGTCCAAGAGGGGATTCTGAGGAAGAAAATTAG 684 0.4664 MASEANVSENSSLFESLLGFRELSVFLPFILGFSTDSSRQDSQDPDQETTNSENSNTHGERVVLINPFTQGMVVIDGNSSLETLFHEIGMKNGQPPASKESIDAMPSVEIGEGEGCGECVICLEEWEVGGVAKEMPCKHKFHQNCIEKWLGIHGSCPICRYQMPVDEKEVGKRDEDEQESGEGGERRSVGREIWVSFSFRSQNTNQAPSDNSSDPSSSPRGDSEEEN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0671 227 FunFam E3 ubiquitin-protein ligase RNF181 85 166 - -
Lele55g0671 227 MobiDBLite consensus disorder prediction 36 60 - -
Lele55g0671 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Lele55g0671 227 Pfam Ring finger domain 118 160 IPR001841 -
Lele55g0671 227 SMART ring_2 119 159 IPR001841 -
Lele55g0671 227 MobiDBLite consensus disorder prediction 195 218 - -
Lele55g0671 227 MobiDBLite consensus disorder prediction 167 189 - -
Lele55g0671 227 ProSiteProfiles Zinc finger RING-type profile. 119 160 IPR001841 -
Lele55g0671 227 SUPERFAMILY RING/U-box 118 165 - -
Lele55g0671 227 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 37 164 - -
Lele55g0671 227 MobiDBLite consensus disorder prediction 167 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0671 Lele-ChrLele55 4465212 4465895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0671 1 199 C3H Transcription Factor Family AT1G26800 49.275 2.10e-61 189