Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele55g0663 | ATGAGCGATCATCTGGTTCTGTATGTTGACCGTCTTGGGCGGCCCACTGCCGCTGACCCGGTCTCGCATCCCGCTCAGGTCCCGTCTGAGCCGGCTCCGCCTATGGATGTGGCTGGACCTTCTAGTTCTGCACCAGCGGTGGATAACGACGCCAGGTCTGAACATGATGGGGATTGTAATGAGGACGAGCCGCTGATCCAGATGGCTGAGTGTCGCATTTGTCAAGAGGAGGATAGCGTTAAGAATTTGGAGACTCCTTGTGCCTGCAGCGGCAGCCTAAAGTTTGCTCACAGAAAGTGCGTTCAACATTGGTGCAATGAAAAGGGAGATATAATTTGTGAGATATGTCATCAGCCTTATCAACCAGGTTATACTGCCCCACCACCTCGTCCCCAACCTGAAGAAACTACCATTGACATCGGTGGGGGCTGGACAATCTCTGGCACACCTTTGGACTTGCGTGATCCTCGACTGTTGGCAATTGCTGAGGCAGAGCGCCAATTCTTGGAAGCTGAATATGATGAGTATGCTGCTTCTAATGCCAGTGGAGCAGCCTTTTGCCGTTCTGCTGCTCTAATTCTAATGGCTCTATTACTCTTGCGGCATGCACTTTCAGTTACAGATTCTGATGCTGATGATGATCCATCTACTTTTTTCTCTCTTTTCTTGCTTAGAGCAGCTGGATTTCTTTTACCCTGCTACATCATGGCTTGGGCAATCAGTATTTTGCAACGTCGGAGACAAAGACAAGAGGCGGCAGCATTGGCAGCAACCCAAGTTGCTTTTGTATTACAATCTGGGCAGCGTAGGGGTCTGCAATTTGCCATAGCACCAGCTGGGCCCACCCTGAATTCGCAACAGGAGCATGTGTAG | 873 | 0.5052 | MSDHLVLYVDRLGRPTAADPVSHPAQVPSEPAPPMDVAGPSSSAPAVDNDARSEHDGDCNEDEPLIQMAECRICQEEDSVKNLETPCACSGSLKFAHRKCVQHWCNEKGDIICEICHQPYQPGYTAPPPRPQPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPAGPTLNSQQEHV | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele55g0663 | 290 | Coils | Coil | 159 | 179 | - | - | |
Lele55g0663 | 290 | Pfam | Protein of unknown function (DUF3675) | 122 | 240 | IPR022143 | - | |
Lele55g0663 | 290 | Pfam | RING-variant domain | 71 | 116 | IPR011016 | GO:0008270 | |
Lele55g0663 | 290 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 63 | 123 | IPR011016 | GO:0008270 | |
Lele55g0663 | 290 | SUPERFAMILY | RING/U-box | 69 | 121 | - | - | |
Lele55g0663 | 290 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 250 | IPR033275 | - | |
Lele55g0663 | 290 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 126 | IPR013083 | - | |
Lele55g0663 | 290 | CDD | RING_CH-C4HC3_MARCH | 71 | 117 | - | - | |
Lele55g0663 | 290 | MobiDBLite | consensus disorder prediction | 15 | 61 | - | - | |
Lele55g0663 | 290 | FunFam | RING/FYVE/PHD zinc finger protein | 59 | 127 | - | - | |
Lele55g0663 | 290 | SMART | ringv_2 | 70 | 117 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele55g0663 | Lele-ChrLele55 | 4412045 | 4414980 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele55g0663 | 70 | 117 | C3H Transcription Factor Family | AT2G37950 | 41.176 | 2.48e-06 | 45.4 |