Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0660 ATGCCTTCGTCAACAGGCATAACTCAAAAAGCAGATGGAAAAAATGAGCTTTCCCCTCAACCTGAGGATTCTCAGATTGATGGTTTCAGAGAAGAGCTGATTAATTTCCTGTTTCAGTGTAACGAATATGTCAACGATTTTGCTGAAGACGGCATAAAAGAAAGTGGAGATGAAGGAACAGAGAGTTCTGTTTCAGAAAAGACAGACTCCAATGATTTTGAAGTTGGCAAGGGCAGAGAAAAAGAAGAGGAGGCAGAGGAAGAAGAAGAAGAGGAATATTTCTCTGCTTCTATGAATGAAGGAGAAGAAGAATTCGAAGCTGACACTAAAATTAACTCAGAATTTTATGATGGTGGCGTGAAAAACGAGAAAGAAGGAGCAGAGAGCTCTGTTACCATAGAGGGAAGCTCCGAGGTTCATGAAAATGGTACCAGAAGAGTAGAAGAAGAAACAGAGAGCTCTGTTGCCATGGAGGATGACTTAGTTTATGAAAATAGCAAGAGAAAAGAAGAAGAAGAAGAAGAGAAAGAAAGAGCAGGCATATCTGCTTTAATGGAGGATGAAGAGATTGAGAGAAAAGAAGAAGAAGAAACAGAGAGGCCTGAATCAATCACTAATAAGTTTGAGTACGTGTCAGGAAGGGATATTATTGGGTTCGTAGAAGAACCAACAACAAAAATGACATTTAGCTTTCGGGAATTCTTTGTGGGTCCATATGTTTCCGACACAGAAATCTCGGAGAAAGAAAAATCTGCTGGAGCACAGAGTTTTCAAGAATTTCATTCATCTCCAAATGCCTCTCATTTGGAAATTCCGGAGCTTGAATCAGAACACAAACCAGTTTTTCAAGAAGAAACACGGAAAGAAATTTCAGAGCTCAAATCAGAGGAAGAAAAATCTATTGGATCAGAGAGTTTTCGAGAATTCCATCCATCTCCAAATGGCTCTGAAGTAGAAATTTCAGAGCTTAAATCAGTGCACGAACCAGTTTTCCAAGAAGAATCACATAAAGAAGCTGATCAAGAGCAGGGTTCTCCAAGTTCTCATGTAAGTCCAAGCGTTTCAGAAACAGAAATTTCTGAGACTAAATCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAACGAGGTATCCATTCAAGAGCAGAGGATGTTGCATGGGCATTCTAGTTCTGATCAATTTAGCCTAAAAAGTGAGATCTTTCGAGGGAGAGATTCATCTGATGATGATGAAGATGATTTGGATTTCATTGACAATTCAGTCGAGTCTGGTTCAGAATCAGAATCATCAAGCTCCAGTGGTCTCATATGGGCCAACAGTGACAAAACTGATGATTTAATCACATACGAGTTTCTATCATATGAGAAAGGTTTCGAAGGATTGGAGCCTGAAACCCTCAAGCTGATGCAAAAGCTAAGAGCCATAGAGGAATTCATAGAACTAGCACCTGGCAAAGCTGAGAATGAAGATGAAAAGAAAGGTTTAAAAGATGAAGAAGAAGAAGGAGATTTTGAATGGGATGATGATGAGTTGGTAGAACAAATGAAAATGGAAATGAGAAATGCAAGACAAGGAGGGCTTCCCACAATTTTAGAGGACGAAGAAGAAGAAGAAGAAGGAGGACAAGAAGTCAGTGAGTCCCCAAGAATGGCTGAAGATCTGAAGCCATTGAAGATTGAAGATCAGAAACAGGAATTCAAGGATCATATCAGAGAAATCATGAAAATTCACAAGAGTTATGAAGAGAAAATGAGGAAGCTTGATATCTTGAACTACCAGACCATGCATGCCCTAGGTCTACGGCAATTGAAAGAGCCAAGTGCGAAGCCTATAATATTAAAGAATTTATTATGGTCAAGAAAAGTTCAGAAGAAGAAGTCGTCGGAGGTAGTGGTGAGGTTGGTGGAGGAGTTGGAGGTGGTGTATGTTGGCCAGCTTTGTTTGTCGTGGGAGATTCTGTGTTGGGAGTATAAGAAAGCGATTGAGTTGAAACAGTACGACGGCGAATGGTTTCGCCGGTATAATGTGGTGGCCGGAGAATTTCAACTGTTTCAAGTGCTGATGCAGAGGTTCATTGAGAATGAGCCTTTTCAAGGACCAAGGATTCACAATTATGTTAGGAACCGTTGTGTCATTCGGAACCTCCTTCAAGTTCCCGCCATTAAAGATGATAGTACGAAGGAGATGATGACAAAGGATGAAGAAGAAGGGGTTTCAAGTGAAAGGTTAGCAGAAATCATCAGAGAATCAATGTACATCTTCTGCAAGTTTGCTCGAGCCGACAAGCACGATATTAGCAACAACAACTTCTTCAAACTTCCTCACCAAACCAGACCAACTCATCTCAAAGATGACCCTGCCACTTGTCATCTTGTTAGAGACATTCAAACCCACCTCCACAAGAAGGAGAAGAGGCTGAAGGACCTAGTGAGAACTGGGAATTGCATAGTGAGGAAGTTTCAGAAGCAGAGTGAAGATAAAGTGGAGCTTGATCTTGAGCAGATGCTGGCTCAGGTTCAGTTGAAGTTGATATCAAGAGTTTTGAGCATGTCAAAGTTGAGAAAAGATCAGCGTCTCACATATCGCAAACGTCACAGCTATGCTACCAAATCCAACCAACACAGGGTTGTCAAAACCCCAGGTGGTAAGCTCGTTTATCAGACCACTAAGAAGAGGGCTAGCGGGCCCAAGTGCCCTGTAACAGGCAAGAGGATTCAAGGGATCCCACACTTGAGGCCTGCTGAATACAAGAGATCAAGGTTACCTAGAAATCGAAGGACCGTGAACCGTGCATATGGTGGAGTTTTGTCTGGAAGTGCTGTCAGAGAAAGGATCATTCGAGCCTTCTTGGTTGAAGAGCAAAAGATTGTCAAAAAGGTGTTGAAGATTCAGAAGGCCAAGGAAAAGCAATCCTTGAAGGGTTAA 2928 0.4139 MPSSTGITQKADGKNELSPQPEDSQIDGFREELINFLFQCNEYVNDFAEDGIKESGDEGTESSVSEKTDSNDFEVGKGREKEEEAEEEEEEEYFSASMNEGEEEFEADTKINSEFYDGGVKNEKEGAESSVTIEGSSEVHENGTRRVEEETESSVAMEDDLVYENSKRKEEEEEEKERAGISALMEDEEIERKEEEETERPESITNKFEYVSGRDIIGFVEEPTTKMTFSFREFFVGPYVSDTEISEKEKSAGAQSFQEFHSSPNASHLEIPELESEHKPVFQEETRKEISELKSEEEKSIGSESFREFHPSPNGSEVEISELKSVHEPVFQEESHKEADQEQGSPSSHVSPSVSETEISETKSEEEEEEEEEEENEVSIQEQRMLHGHSSSDQFSLKSEIFRGRDSSDDDEDDLDFIDNSVESGSESESSSSSGLIWANSDKTDDLITYEFLSYEKGFEGLEPETLKLMQKLRAIEEFIELAPGKAENEDEKKGLKDEEEEGDFEWDDDELVEQMKMEMRNARQGGLPTILEDEEEEEEGGQEVSESPRMAEDLKPLKIEDQKQEFKDHIREIMKIHKSYEEKMRKLDILNYQTMHALGLRQLKEPSAKPIILKNLLWSRKVQKKKSSEVVVRLVEELEVVYVGQLCLSWEILCWEYKKAIELKQYDGEWFRRYNVVAGEFQLFQVLMQRFIENEPFQGPRIHNYVRNRCVIRNLLQVPAIKDDSTKEMMTKDEEEGVSSERLAEIIRESMYIFCKFARADKHDISNNNFFKLPHQTRPTHLKDDPATCHLVRDIQTHLHKKEKRLKDLVRTGNCIVRKFQKQSEDKVELDLEQMLAQVQLKLISRVLSMSKLRKDQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQSLKG 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0660 975 PANTHER OS09G0413600 PROTEIN 170 858 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 486 505 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 486 500 - -
Lele55g0660 975 Gene3D - 857 893 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 49 205 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 49 82 - -
Lele55g0660 975 Coils Coil 356 384 - -
Lele55g0660 975 Gene3D - 894 975 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 83 102 - -
Lele55g0660 975 PRINTS Ribosomal protein L34 signature 899 909 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele55g0660 975 PRINTS Ribosomal protein L34 signature 881 898 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele55g0660 975 PRINTS Ribosomal protein L34 signature 868 881 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele55g0660 975 PRINTS Ribosomal protein L34 signature 921 943 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele55g0660 975 MobiDBLite consensus disorder prediction 103 128 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 1 28 - -
Lele55g0660 975 Pfam Ribosomal protein L34e 858 951 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele55g0660 975 Pfam Protein of unknown function (DUF1666) 638 858 IPR012870 -
Lele55g0660 975 MobiDBLite consensus disorder prediction 161 188 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 250 265 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 1 22 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 321 343 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 527 552 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 361 378 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 344 358 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 245 440 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 271 305 - -
Lele55g0660 975 MobiDBLite consensus disorder prediction 383 398 - -
Lele55g0660 975 ProSitePatterns Ribosomal protein L34e signature. 870 883 IPR018065 -
Lele55g0660 975 MobiDBLite consensus disorder prediction 421 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0660 Lele-ChrLele55 4378286 4387566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0660 858 974 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 91.453 1.35e-62 206