Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0649 ATGATCATGGAGGAGGTAGATCATCATTCTAATGGGATCCGCAGACCCAATTTCCCTCTGCAACTGTTGGAGAAGAAAAATGGTGAACAGAGACAGCGGGATGATGATGATGCAACTGTAGCGAAAGCTGGCTTTGTTGACCCGACCCGACCCAATAATAACCTCCAGCTCGCCGACCAATCCAAGAAGCCGCCTCCGAAGAGAACCTCCACGAAGGACAGGCATACCAAGGTGGAAGGTCGGGGCCGTCGGATCCGCATGCCGGCAGCTTGTGCTGCTAGAGTTTTTCAGCTTACCAGGGAGCTCGGACATAAGTCCGACGGTGAGACCATCGAGTGGCTGCTCCAGCAGGCGGAACCCGCCGTGATCGCCGCCACCGGGACTGGGACCATTCCCGCCAATTTCACTTCGCTTAACATCTCGCTCCGCAGCTCCGGCTCGACTATGTCGGCGCCGTCGCAATACTTCAGGGGTAATAGTTATAGTAATTACTTCAGTCCCAGCTTGTTTTCTTCATCGTTGCAGTTGAGAAACACGGTGGTGGATGATTCCAGAAGGATATTGTTCCCCGGGGCCGGCGCCGTTGGGTTTTCTTCCTCCTCCTCCTCCTCCGAGAATTCTTTGATGAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCCCAGGGAAGAAACTGGCGGCGTCGGAGGTGGCGGCCTTGAATCAACGACAACAGAAACCGAAGGATGTTTAGGGAAAAAGAGACGGTCATCAGAACAAGAACTAACACATAGTCACATGGGAAGTTATTTGTTACAATCCAGTACAGGCTCAATTCCGGCAAGTCATTCATCAGTTCCGGCGACGTTTTGGATGGTAAGTAGCCCCGCCGGAAACAACCAATCCATAGGCAGCAGTGGAGGCAACAACGGAAACAGCGGAAGCAGTAGTGGTGGTGATCCCATATGGGCAATTCCTTCAGTTGGTAATTATAGTAACACGTATAGAGGCGCCATGCCTAGCAGTGGGATTCATTTTAGGAATTTTGGTTCTCAAATGGCTCTGATGGGCGGTGGTATGAATGAAAGCAACTTAGGCATGCTTGCAGCCCTAAATGCATACAGGCAGATTCCGGCGAGCGGCGTTCGGAGTCTCCGGCGATTACTTGGCACGGAGGAGGTCAGCATTCCTGATCAGGAATAA 1206 0.5149 MIMEEVDHHSNGIRRPNFPLQLLEKKNGEQRQRDDDDATVAKAGFVDPTRPNNNLQLADQSKKPPPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVVDDSRRILFPGAGAVGFSSSSSSSENSLMNNFSSASNVNAMLQLSKQEPREETGGVGGGGLESTTTETEGCLGKKRRSSEQELTHSHMGSYLLQSSTGSIPASHSSVPATFWMVSSPAGNNQSIGSSGGNNGNSGSSSGGDPIWAIPSVGNYSNTYRGAMPSSGIHFRNFGSQMALMGGGMNESNLGMLAALNAYRQIPASGVRSLRRLLGTEEVSIPDQE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0649 401 MobiDBLite consensus disorder prediction 26 41 - -
Lele55g0649 401 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 352 IPR005333 GO:0003700
Lele55g0649 401 MobiDBLite consensus disorder prediction 227 263 - -
Lele55g0649 401 Pfam TCP family transcription factor 69 215 IPR017887 -
Lele55g0649 401 MobiDBLite consensus disorder prediction 249 263 - -
Lele55g0649 401 MobiDBLite consensus disorder prediction 1 81 - -
Lele55g0649 401 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Lele55g0649 401 MobiDBLite consensus disorder prediction 65 81 - -
Lele55g0649 401 MobiDBLite consensus disorder prediction 49 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0649 Lele-ChrLele55 4297013 4298218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0649 261 382 TCP Transcription Factor Family AT1G69690 33.824 3.50e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele55g0649 TCP 3.5e-36 No_clan